RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 MUC6Q6W4X9 2439 aa16.54■□□□□ 0.24
SNRPB-202ENST00000438552 SHROOM3Q8TF72 1996 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 LRRD1A4D1F6 860 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 TTC34A8MYJ7 566 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 RASA4BC9J798 803 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 DCLK1O15075 740 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 RASA4O43374 803 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 APBB3O95704 486 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 CCDC175P0C221 793 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 ETFBP38117 255 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 STARD3Q14849 445 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 LRRC38Q5VT99 294 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 ANO7Q6IWH7 933 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 ZNF354CQ86Y25 554 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 ARHGAP12Q8IWW6 846 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 UMODL1-AS1Q8N2C9 162 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 LRRC57Q8N9N7 239 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 MDGA1Q8NFP4 955 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 HMGB4Q8WW32 186 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 ZNF830Q96NB3 372 aaPredicted RBP16.53■□□□□ 0.24
SNRPB-202ENST00000438552 ZNF670Q9BS34 389 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 ACE2Q9BYF1 805 aaPredicted RBP16.53■□□□□ 0.24
SNRPB-202ENST00000438552 KLC2Q9H0B6 622 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 SLC6A17Q9H1V8 727 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 POLMQ9NP87 494 aaPredicted RBP16.53■□□□□ 0.24
SNRPB-202ENST00000438552 RCOR3Q9P2K3 495 aaPredicted RBP16.53■□□□□ 0.24
SNRPB-202ENST00000438552 ARIH1Q9Y4X5 557 aaPredicted RBP16.53■□□□□ 0.24
SNRPB-202ENST00000438552 ACTL7AQ9Y615 435 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 CAPN6Q9Y6Q1 641 aa16.53■□□□□ 0.24
SNRPB-202ENST00000438552 PSTPIP1O43586 416 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 ZMPSTE24O75844 475 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 MT-CO1P00395 513 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 VAV1P15498 845 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 KDELR1P24390 212 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 IL4RP24394 825 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 FNTBP49356 437 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 ARF5P84085 180 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 PDK2Q15119 407 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 PARP15Q460N3 678 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 TMCO3Q6UWJ1 677 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 LEKR1Q6ZMV7 388 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 CACUL1Q86Y37 369 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 TP53INP2Q8IXH6 220 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 SH2D3CQ8N5H7 860 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 KRT35Q92764 455 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 CALR3Q96L12 384 aaKnown RBP16.52■□□□□ 0.24
SNRPB-202ENST00000438552 TPSD1Q9BZJ3 242 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 TSGA10Q9BZW7 698 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 LRRC19Q9H756 370 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 GUCA1BQ9UMX6 200 aa16.52■□□□□ 0.24
SNRPB-202ENST00000438552 PLXND1Q9Y4D7 1925 aa16.52■□□□□ 0.23
SNRPB-202ENST00000438552 C3orf70A6NLC5 250 aaPredicted RBP16.51■□□□□ 0.23
SNRPB-202ENST00000438552 K7ERQ8 282 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 KRT86O43790 486 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 MFSD11O43934 449 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 SYNCRIPO60506 623 aaKnown RBP16.51■□□□□ 0.23
SNRPB-202ENST00000438552 PALMO75781 387 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 SRCP12931 536 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 GABRG2P18507 467 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 NDUFV2P19404 249 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 NDST2P52849 883 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 PTPN5P54829 565 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 YBEYP58557 167 aaPredicted RBP16.51■□□□□ 0.23
SNRPB-202ENST00000438552 SERINC3Q13530 473 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 IFI16Q16666 785 aaKnown RBP16.51■□□□□ 0.23
SNRPB-202ENST00000438552 HNRNPA1L2Q32P51 320 aaKnown RBP16.51■□□□□ 0.23
SNRPB-202ENST00000438552 ZNF528Q3MIS6 628 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 ANKRD20A8PQ5CZ79 823 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 AFMIDQ63HM1 303 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 MAP7D3Q8IWC1 876 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 CAMKK1Q8N5S9 505 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 ATP11CQ8NB49 1132 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 KDM1BQ8NB78 822 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 PCDH19Q8TAB3 1148 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 KIAA1524Q8TCG1 905 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 FAF2Q96CS3 445 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 SLC39A8Q9C0K1 460 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 KCNH6Q9H252 994 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 LZTFL1Q9NQ48 299 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 DDX56Q9NY93 547 aaKnown RBP16.51■□□□□ 0.23
SNRPB-202ENST00000438552 DONSONQ9NYP3 566 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 BCCIPQ9P287 314 aaKnown RBP eCLIP16.51■□□□□ 0.23
SNRPB-202ENST00000438552 HS3ST2Q9Y278 367 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 PPP2R2CQ9Y2T4 447 aa16.51■□□□□ 0.23
SNRPB-202ENST00000438552 EDDM13A0A1B0GTR0 161 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 DFFAO00273 331 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 SMAD6O43541 496 aaKnown RBP16.5■□□□□ 0.23
SNRPB-202ENST00000438552 ATP9BO43861 1147 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 SIN3BO75182 1162 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 ALDH1A2O94788 518 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 FTCDO95954 541 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 HOXA6P31267 233 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 NNMTP40261 264 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 SERPINH1P50454 418 aaKnown RBP16.5■□□□□ 0.23
SNRPB-202ENST00000438552 PAPOLAP51003 745 aaKnown RBP16.5■□□□□ 0.23
SNRPB-202ENST00000438552 COPAP53621 1224 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 CAMK2GQ13555 558 aaPredicted RBP16.5■□□□□ 0.23
SNRPB-202ENST00000438552 ACCSLQ4AC99 568 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 ODF2Q5BJF6 829 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 NCBP2-AS2Q69YL0 99 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms