RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 ALDOAP04075 364 aaKnown RBP4.29□□□□□ -1.72
LINC00353-201ENST00000435401 ALDOCP09972 364 aaKnown RBP4.29□□□□□ -1.72
LINC00353-201ENST00000435401 RFPL3SP0C7P2 107 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 IGFBP2P18065 325 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 RPS6KB1P23443 525 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 TBXAS1P24557 533 aaPredicted RBP4.29□□□□□ -1.72
LINC00353-201ENST00000435401 AVPR2P30518 371 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 HOXA7P31268 230 aaPredicted RBP4.29□□□□□ -1.72
LINC00353-201ENST00000435401 PGGT1BP53609 377 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 ZXDBP98169 803 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 CHRNDQ07001 517 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 CDK18Q07002 472 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 HYAL1Q12794 435 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 G3BP1Q13283 466 aaKnown RBP eCLIP4.29□□□□□ -1.72
LINC00353-201ENST00000435401 SLC4A8Q2Y0W8 1093 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 CTXN3Q4LDR2 81 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 ZNF585BQ52M93 769 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 MAP3K21Q5TCX8 1036 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 JAKMIP3Q5VZ66 844 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 SLC39A5Q6ZMH5 540 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 Q6ZTC4 211 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 DCP1BQ8IZD4 617 aaKnown RBP4.29□□□□□ -1.72
LINC00353-201ENST00000435401 PTGR2Q8N8N7 351 aaPredicted RBP4.29□□□□□ -1.72
LINC00353-201ENST00000435401 SLC44A5Q8NCS7 719 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 PIGKQ92643 395 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 HTRA1Q92743 480 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 CELF1Q92879 486 aaKnown RBP4.29□□□□□ -1.72
LINC00353-201ENST00000435401 PIGSQ96S52 555 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 GATA5Q9BWX5 397 aaPredicted RBP4.29□□□□□ -1.72
LINC00353-201ENST00000435401 MRPL44Q9H9J2 332 aaKnown RBP4.29□□□□□ -1.72
LINC00353-201ENST00000435401 PRDM16Q9HAZ2 1276 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 RASSF1Q9NS23 344 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 ICKQ9UPZ9 632 aa4.29□□□□□ -1.72
LINC00353-201ENST00000435401 NPIPB13A6NJU9 1138 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 NPIPB5A8MRT5 1133 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 TTC34A8MYJ7 566 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 NPIPB4C9JG80 1138 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 F8W810 466 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 PRPF4O43172 522 aaKnown RBP eCLIP4.28□□□□□ -1.72
LINC00353-201ENST00000435401 HOXC11O43248 304 aaPredicted RBP4.28□□□□□ -1.72
LINC00353-201ENST00000435401 ZC3H11AO75152 810 aaKnown RBP eCLIP4.28□□□□□ -1.72
LINC00353-201ENST00000435401 NDUFB8O95169 186 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 SLC3A2P08195 630 aaKnown RBP4.28□□□□□ -1.72
LINC00353-201ENST00000435401 PRPH2P23942 346 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 MT3P25713 68 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 PCP4P48539 62 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 RGS19P49795 217 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 DMWDQ09019 674 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 MTFR2Q6P444 385 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 PDXDC1Q6P996 788 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 BBS12Q6ZW61 710 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 RFX6Q8HWS3 928 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 EXD3Q8N9H8 876 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 SRFBP1Q8NEF9 429 aaKnown RBP4.28□□□□□ -1.72
LINC00353-201ENST00000435401 HVCN1Q96D96 273 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 ZNF845Q96IR2 970 aaPredicted RBP4.28□□□□□ -1.72
LINC00353-201ENST00000435401 NAP1L4Q99733 375 aaKnown RBP4.28□□□□□ -1.72
LINC00353-201ENST00000435401 GPR63Q9BZJ6 419 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 IL21RQ9HBE5 538 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 NOD2Q9HC29 1040 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.28□□□□□ -1.72
LINC00353-201ENST00000435401 PNMA2Q9UL42 364 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 COG5Q9UP83 839 aa4.28□□□□□ -1.72
LINC00353-201ENST00000435401 SIRT4Q9Y6E7 314 aaPredicted RBP4.28□□□□□ -1.72
LINC00353-201ENST00000435401 SLC22A23A1A5C7 686 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 C3orf70A6NLC5 250 aaPredicted RBP4.27□□□□□ -1.73
LINC00353-201ENST00000435401 A6NLC8 198 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 HNRNPRO43390 633 aaKnown RBP4.27□□□□□ -1.73
LINC00353-201ENST00000435401 KRT86O43790 486 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 CNTN5O94779 1100 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 ATP1A3P13637 1013 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 CD53P19397 219 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 LIFRP42702 1097 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 NR1H2P55055 460 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 TLE2Q04725 743 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 MTA1Q13330 715 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 TRPC3Q13507 836 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 TDGQ13569 410 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 KRT81Q14533 505 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 ANKRD1Q15327 319 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 CBWD5Q5RIA9 395 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 SLC9C2Q5TAH2 1124 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 ATG16L1Q676U5 607 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 DHRS13Q6UX07 377 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 RBM44Q6ZP01 1051 aaKnown RBP4.27□□□□□ -1.73
LINC00353-201ENST00000435401 RNF144BQ7Z419 303 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 RHPN2Q8IUC4 686 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 UEVLDQ8IX04 471 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 VPS52Q8N1B4 723 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 ZNF479Q96JC4 524 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 ZNF347Q96SE7 839 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 MEIS3Q99687 375 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 NPAS1Q99742 590 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 ABHD14AQ9BUJ0 271 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 HTATIP2Q9BUP3 242 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 RNF26Q9BY78 433 aaPredicted RBP4.27□□□□□ -1.73
LINC00353-201ENST00000435401 CTDSP1Q9GZU7 261 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 MAF1Q9H063 256 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 ACAD9Q9H845 621 aa4.27□□□□□ -1.73
LINC00353-201ENST00000435401 WASH6PQ9NQA3 447 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms