RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 FAM193BQ96PV7 902 aaPredicted RBP15.89■□□□□ 0.13
SCARF1-203ENST00000434376 PPP1R10Q96QC0 940 aaKnown RBP15.89■□□□□ 0.13
SCARF1-203ENST00000434376 EPAS1Q99814 870 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 FICDQ9BVA6 458 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 SLC2A6Q9UGQ3 507 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 WFS1O76024 890 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 POLBP06746 335 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 ITGA2BP08514 1039 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 ROR2Q01974 943 aaKnown RBP15.89■□□□□ 0.13
SCARF1-203ENST00000434376 MGAT5BQ3V5L5 792 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 WASHC2DQ5SRD0 308 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 MFSD14CQ5VZR4 134 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 OR6P1Q8NGX9 317 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 FSD1LQ9BXM9 530 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 NACA2Q9H009 215 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 BPTFQ12830 3046 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 PRR5-ARHGAP8B1AHC4 643 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 PDE5AO76074 875 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 SORBS2O94875 1100 aaKnown RBP15.89■□□□□ 0.13
SCARF1-203ENST00000434376 CPB1P15086 417 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 ARSAP15289 507 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 ARHGAP8P85298 464 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 IZUMO2Q6UXV1 221 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 TMCO2Q7Z6W1 182 aaPredicted RBP15.89■□□□□ 0.13
SCARF1-203ENST00000434376 ZNF467Q7Z7K2 595 aaPredicted RBP15.89■□□□□ 0.13
SCARF1-203ENST00000434376 C14orf80Q86SX3 495 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 CASP10Q92851 521 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 BTBD10Q9BSF8 475 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 TASP1Q9H6P5 420 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 CHST12Q9NRB3 414 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 GTF2IRD1Q9UHL9 959 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 LRCH1Q9Y2L9 728 aa15.89■□□□□ 0.13
SCARF1-203ENST00000434376 TK2O00142 265 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 CFLARO15519 480 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 RPS6KA3P51812 740 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 SLC5A3P53794 718 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 SLC25A3Q00325 362 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 CNGA3Q16281 694 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 TREML1Q86YW5 311 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 PDCD6IPQ8WUM4 868 aaKnown RBP15.88■□□□□ 0.13
SCARF1-203ENST00000434376 NSL1Q96IY1 281 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 FCRL2Q96LA5 508 aaPredicted RBP15.88■□□□□ 0.13
SCARF1-203ENST00000434376 PCDHA11Q9Y5I1 949 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 A0A1W2PQH9 124 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 PSMG1O95456 288 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 PYGLP06737 847 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 ACADSP16219 412 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 MPP1Q00013 466 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 YWHAHQ04917 246 aaPredicted RBP15.88■□□□□ 0.13
SCARF1-203ENST00000434376 CCDC15Q0P6D6 951 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 USP10Q14694 798 aaKnown RBP15.88■□□□□ 0.13
SCARF1-203ENST00000434376 STRADAQ7RTN6 431 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 SAPCD2Q86UD0 394 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 B4GALNT2Q8NHY0 566 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 OXNAD1Q96HP4 312 aaPredicted RBP15.88■□□□□ 0.13
SCARF1-203ENST00000434376 SPON2Q9BUD6 331 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 NMUR1Q9HB89 426 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 XAB2Q9HCS7 855 aaKnown RBP15.88■□□□□ 0.13
SCARF1-203ENST00000434376 NT5MQ9NPB1 228 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 RBM22Q9NW64 420 aaKnown RBP eCLIP15.88■□□□□ 0.13
SCARF1-203ENST00000434376 GDAP2Q9NXN4 497 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 SBF1O95248 1867 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 NEMP2A6NFY4 417 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 GSC2O15499 205 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 PAGE1O75459 146 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 CD1EP15812 388 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 PCSK1P29120 753 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 TSPY1Q01534 308 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 SLC34A1Q06495 639 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 PSMD5Q16401 504 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 TAF2Q6P1X5 1199 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 ATPAF2Q8N5M1 289 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 SMC1BQ8NDV3 1235 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 CERS2Q96G23 380 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 SMARCD1Q96GM5 515 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 DNAI2Q9GZS0 605 aa15.88■□□□□ 0.13
SCARF1-203ENST00000434376 MTF2Q9Y483 593 aaPredicted RBP15.88■□□□□ 0.13
SCARF1-203ENST00000434376 DPYSL4O14531 572 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 TADA2AO75478 443 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 GCATO75600 419 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 KCNE1P15382 129 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 ABI1Q8IZP0 508 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 WDR55Q9H6Y2 383 aaPredicted RBP15.87■□□□□ 0.13
SCARF1-203ENST00000434376 WDR6Q9NNW5 1121 aaKnown RBP15.87■□□□□ 0.13
SCARF1-203ENST00000434376 SMAPO00193 183 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 AURKAO14965 403 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 TM9SF1O15321 606 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 DAB1O75553 588 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 HSPA4LO95757 839 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 CUL3Q13618 768 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 C1orf146Q5VVC0 180 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 IRGCQ6NXR0 463 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 PTAR1Q7Z6K3 402 aaPredicted RBP15.87■□□□□ 0.13
SCARF1-203ENST00000434376 MFN1Q8IWA4 741 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 ARNTL2Q8WYA1 636 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 RNF186Q9NXI6 227 aa15.87■□□□□ 0.13
SCARF1-203ENST00000434376 GON4LQ3T8J9 2241 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 A0A096LPK6 155 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 OR51F1A6NGY5 319 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 CIB2O75838 187 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms