RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 M0QYT0 321 aa12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 SNAI1O95863 264 aaPredicted RBP12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 BPGMP07738 259 aa12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 PSMB4P28070 264 aa12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 UBAP2LQ14157 1087 aaKnown RBP12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 HSF5Q4G112 596 aaPredicted RBP12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 FAM209AQ5JX71 171 aa12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 N4BP2L1Q5TBK1 243 aaPredicted RBP12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 ITPRIPL1Q6GPH6 555 aa12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 OGFOD2Q6N063 350 aa12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 RIPOR1Q6ZS17 1223 aa12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 CPNE9Q8IYJ1 553 aa12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 CDKL2Q92772 493 aa12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 P2RY11Q96G91 374 aa12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 PRPF18Q99633 342 aaKnown RBP12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 WWP1Q9H0M0 922 aa12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 LRRC4Q9HBW1 653 aa12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 VTA1Q9NP79 307 aa12.48□□□□□ -0.41
SEMA3F-206ENST00000434342 SMIM28A0A1B0GU29 152 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 CCDC78A2IDD5 438 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 PRR5-ARHGAP8B1AHC4 643 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 TPP1O14773 563 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 CYP2C9P11712 490 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 VCLP18206 1134 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 PEX2P28328 305 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 PTPN9P43378 593 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 NR2C2P49116 596 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 ARHGAP8P85298 464 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 DGKDQ16760 1214 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 Q6ZNX1 250 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 DNAJB3Q8WWF6 145 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 CCDC124Q96CT7 223 aaKnown RBP12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 MTBPQ96DY7 904 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 NSMCE3Q96MG7 304 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 MED10Q9BTT4 135 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 PAIP1Q9H074 479 aaKnown RBP12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 PRDM12Q9H4Q4 367 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 TRPV5Q9NQA5 729 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 DDX43Q9NXZ2 648 aaKnown RBP12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 KCNK4Q9NYG8 393 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 CARD8Q9Y2G2 431 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 SCN1AP35498 2009 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 A0A0A0MRY4 1105 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 PDHXO00330 501 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 MATN2O00339 956 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 HUS1O60921 280 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 STAU1O95793 577 aaKnown RBP12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 TYK2P29597 1187 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 ZNF792Q3KQV3 632 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 RSPH3Q86UC2 560 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 UNC93AQ86WB7 457 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 ZDHHC17Q8IUH5 632 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 RBM15BQ8NDT2 890 aaKnown RBP12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 KBTBD7Q8WVZ9 684 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 ATP2A3Q93084 1043 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 PRICKLE1Q96MT3 831 aaPredicted RBP12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 SPATA13Q96N96 652 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 QKIQ96PU8 341 aaKnown RBP eCLIP12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 SIAEQ9HAT2 523 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 PLEKHA5Q9HAU0 1116 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 ARHGEF4Q9NR80 690 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 UBQLN1Q9UMX0 589 aaKnown RBP12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 DNAJC16Q9Y2G8 782 aa12.47□□□□□ -0.41
SEMA3F-206ENST00000434342 E9PBE3 544 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 ITM2AO43736 263 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 GK3PQ14409 553 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 TRIP10Q15642 601 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 SYPL2Q5VXT5 272 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 ZNF410Q86VK4 478 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 BBS5Q8N3I7 341 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 APOL2Q9BQE5 337 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 TLE6Q9H808 572 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 TIMMDC1Q9NPL8 285 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 SACM1LQ9NTJ5 587 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 SIRPGQ9P1W8 387 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 KLHL8Q9P2G9 620 aaPredicted RBP12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 MEI4A8MW99 385 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 BEST1O76090 585 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 MMP3P08254 477 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 RARBP10826 455 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 TPSB2P20231 275 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 IGFBP6P24592 240 aaPredicted RBP12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 CRHR1P34998 444 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 MATKP42679 507 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 RPL5P46777 297 aaKnown RBP12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 TRPC1P48995 793 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 SERPINB9P50453 376 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 IFRD2Q12894 506 aaPredicted RBP12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 TPSAB1Q15661 275 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 CTU1Q7Z7A3 348 aaKnown RBP12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 LRRC52Q8N7C0 313 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 DNAAF3Q8N9W5 541 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 AGR3Q8TD06 166 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 RNF139Q8WU17 664 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 C7orf26Q96N11 449 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 ANLNQ9NQW6 1124 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 ZNF358Q9NW07 568 aa12.46□□□□□ -0.41
SEMA3F-206ENST00000434342 DCAF8L1A6NGE4 600 aa12.46□□□□□ -0.42
SEMA3F-206ENST00000434342 KLF11O14901 512 aa12.46□□□□□ -0.42
SEMA3F-206ENST00000434342 FUCA1P04066 466 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms