RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 RPS6KL1Q9Y6S9 549 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 ARHGAP42A6NI28 874 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 HNRNPCL1O60812 293 aaKnown RBP12.19□□□□□ -0.46
CTCFL-209ENST00000433949 USP1O94782 785 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 SLC2A3P11169 496 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 NRG1Q02297 640 aaPredicted RBP12.19□□□□□ -0.46
CTCFL-209ENST00000433949 MROH9Q5TGP6 573 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 KIAA1841Q6NSI8 718 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 TMEM135Q86UB9 458 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 MON1AQ86VX9 555 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 NDUFAF2Q8N183 169 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 DNAAF3Q8N9W5 541 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 SCAMP5Q8TAC9 235 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 AUTS2Q8WXX7 1259 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 CERS2Q96G23 380 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 TMEM169Q96HH4 297 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 PGLYRP2Q96PD5 576 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 RAD9AQ99638 391 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 CPNE1Q99829 537 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 VN1R3Q9BXE9 311 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 IL22Q9GZX6 179 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 ZCWPW1Q9H0M4 648 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 MTIF3Q9H2K0 278 aaKnown RBP12.19□□□□□ -0.46
CTCFL-209ENST00000433949 DONSONQ9NYP3 566 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 GGT7Q9UJ14 662 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 AAR2Q9Y312 384 aaKnown RBP12.19□□□□□ -0.46
CTCFL-209ENST00000433949 LTBP2Q14767 1821 aa12.19□□□□□ -0.46
CTCFL-209ENST00000433949 HMX2A2RU54 273 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 ZBTB24O43167 697 aaPredicted RBP12.18□□□□□ -0.46
CTCFL-209ENST00000433949 UGT1A9O60656 530 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 SRGAP2BP0DMP2 458 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 BMPR2Q13873 1038 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 CTXN3Q4LDR2 81 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 SLC39A12Q504Y0 691 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 GRTP1Q5TC63 336 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 PACS1Q6VY07 963 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 CCDC91Q7Z6B0 441 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 SUGP1Q8IWZ8 645 aaKnown RBP12.18□□□□□ -0.46
CTCFL-209ENST00000433949 TP53INP2Q8IXH6 220 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 KLHDC8BQ8IXV7 354 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 ERP27Q96DN0 273 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 TBC1D31Q96DN5 1066 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 C8orf48Q96LL4 319 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 C7orf26Q96N11 449 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 AGAP3Q96P47 875 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 UGT1A7Q9HAW7 530 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 UGT1A10Q9HAW8 530 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 UGT1A8Q9HAW9 530 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 NPHS2Q9NP85 383 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 SIRPGQ9P1W8 387 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 DCDC2Q9UHG0 476 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 SCML2Q9UQR0 700 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 CHKBQ9Y259 395 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 MIA3Q5JRA6 1907 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 COL4A6Q14031 1691 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 FAM237BA0A1B0GVD1 139 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 F5H423 210 aaPredicted RBP12.18□□□□□ -0.46
CTCFL-209ENST00000433949 MGRN1O60291 552 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 GLRA3O75311 464 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 ARHGEF15O94989 841 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 GP5P40197 560 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 CRADDP78560 199 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 HTRA4P83105 476 aaPredicted RBP12.18□□□□□ -0.46
CTCFL-209ENST00000433949 CDH17Q12864 832 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 INSCQ1MX18 579 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 MANEALQ5VSG8 457 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 TIGD7Q6NT04 549 aaPredicted RBP12.18□□□□□ -0.46
CTCFL-209ENST00000433949 RWDD4Q6NW29 188 aaKnown RBP12.18□□□□□ -0.46
CTCFL-209ENST00000433949 RSPO2Q6UXX9 243 aaPredicted RBP12.18□□□□□ -0.46
CTCFL-209ENST00000433949 NLRP9Q7RTR0 991 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 PARP9Q8IXQ6 854 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 NUP93Q8N1F7 819 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 ATPAF2Q8N5M1 289 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.18□□□□□ -0.46
CTCFL-209ENST00000433949 NETO2Q8NC67 525 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 OR52K1Q8NGK4 314 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 PTPRN2Q92932 1015 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 TRIM56Q9BRZ2 755 aaKnown RBP12.18□□□□□ -0.46
CTCFL-209ENST00000433949 TTPALQ9BTX7 342 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 SLC13A1Q9BZW2 595 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 MYLK2Q9H1R3 596 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 CERS4Q9HA82 394 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 ALG13Q9NP73 1137 aaKnown RBP12.18□□□□□ -0.46
CTCFL-209ENST00000433949 PCMTD2Q9NV79 361 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 MTO1Q9Y2Z2 717 aaKnown RBP12.18□□□□□ -0.46
CTCFL-209ENST00000433949 GREB1Q4ZG55 1949 aa12.18□□□□□ -0.46
CTCFL-209ENST00000433949 CACNG3O60359 315 aa12.17□□□□□ -0.46
CTCFL-209ENST00000433949 PAGE1O75459 146 aa12.17□□□□□ -0.46
CTCFL-209ENST00000433949 ITGA2BP08514 1039 aa12.17□□□□□ -0.46
CTCFL-209ENST00000433949 NQO1P15559 274 aaKnown RBP12.17□□□□□ -0.46
CTCFL-209ENST00000433949 LAG3P18627 525 aa12.17□□□□□ -0.46
CTCFL-209ENST00000433949 NFKB1P19838 968 aa12.17□□□□□ -0.46
CTCFL-209ENST00000433949 CD68P34810 354 aaPredicted RBP12.17□□□□□ -0.46
CTCFL-209ENST00000433949 PBX2P40425 430 aa12.17□□□□□ -0.46
CTCFL-209ENST00000433949 MAGEA11P43364 429 aa12.17□□□□□ -0.46
CTCFL-209ENST00000433949 ELF3P78545 371 aaPredicted RBP12.17□□□□□ -0.46
CTCFL-209ENST00000433949 CDK18Q07002 472 aa12.17□□□□□ -0.46
CTCFL-209ENST00000433949 ZBTB17Q13105 803 aa12.17□□□□□ -0.46
CTCFL-209ENST00000433949 RIPK1Q13546 671 aa12.17□□□□□ -0.46
CTCFL-209ENST00000433949 ACBD5Q5T8D3 534 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms