RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 ACTR2P61160 394 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 NIPAL4Q0D2K0 466 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 FSTL4Q6MZW2 842 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 FAM183BPQ6ZVS7 135 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 PODNQ7Z5L7 613 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 WDR49Q8IV35 697 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 SIX6OS1Q8N1H7 587 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 CCDC97Q96F63 343 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 IL1RL2Q9HB29 575 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 JPH1Q9HDC5 661 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 GMPR2Q9P2T1 348 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 COPG1Q9Y678 874 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 TNNC2P02585 160 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 C2P06681 752 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 GRIA3P42263 894 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 BMXP51813 675 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 DPYSQ14117 519 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 DGKDQ16760 1214 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 CYP4V2Q6ZWL3 525 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 CHSY3Q70JA7 882 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 BRSK2Q8IWQ3 736 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 SCUBE3Q8IX30 993 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 CBR4Q8N4T8 237 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 DCPSQ96C86 337 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 OMDQ99983 421 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 NEURL2Q9BR09 285 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 SLC39A3Q9BRY0 314 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 TRPC7Q9HCX4 862 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 SPATA7Q9P0W8 599 aa11.76□□□□□ -0.53
HMGCS1-202ENST00000433297 H3BMQ9 156 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 PHGDHO43175 533 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 POLBP06746 335 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 NR3C2P08235 984 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 NFKBIAP25963 317 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 MAGEA3P43357 314 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 PTPN11Q06124 597 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 INSCQ1MX18 579 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 DHRS4L2Q6PKH6 230 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 LYSMD3Q7Z3D4 306 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 SLC7A5P1Q8MH63 180 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 DNAAF3Q8N9W5 541 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 ACVR1CQ8NER5 493 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 TBC1D15Q8TC07 691 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 COG8Q96MW5 612 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 EFHD1Q9BUP0 239 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 LHX5Q9H2C1 402 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 RPF2Q9H7B2 306 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 ZBTB26Q9HCK0 441 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 PDLIM7Q9NR12 457 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 GTSE1Q9NYZ3 720 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 STYXL1Q9Y6J8 313 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 NRAPQ86VF7 1730 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 TCAF2A6NFQ2 919 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 ENDOD1O94919 500 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 STBD1O95210 358 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 SDC4P31431 198 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 SPRP35270 261 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 TUBA4AP68366 448 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 PRKCQQ04759 706 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 TRIM16LQ309B1 348 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 CCDC14Q49A88 953 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 BOLA3Q53S33 107 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 C6orf183Q5T699 404 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 CANT1Q8WVQ1 401 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 CASP10Q92851 521 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 ASB9Q96DX5 294 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 CERS2Q96G23 380 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 TSNARE1Q96NA8 513 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 HNRNPABQ99729 332 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 MTG1Q9BT17 334 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 VPS33BQ9H267 617 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 PPP1R1BQ9UD71 204 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 RAP2CQ9Y3L5 183 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 CORINQ9Y5Q5 1042 aa11.75□□□□□ -0.53
HMGCS1-202ENST00000433297 SYNJ2BP-COX16A0A087WUM0 186 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 C2CD4BA6NLJ0 364 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 C9IYK1 514 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 PAPSS1O43252 624 aaPredicted RBP11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 KCNH1O95259 989 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 BMP10O95393 424 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 ZNF12P17014 697 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 PGAM1P18669 254 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 TPSB2P20231 275 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 NR4A1P22736 598 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 RHDQ02161 417 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 CNTN2Q02246 1040 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 ITGA7Q13683 1181 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 PLCL1Q15111 1095 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 PDK2Q15119 407 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 TPSAB1Q15661 275 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 RGS21Q2M5E4 152 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 AGKQ53H12 422 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 DACT2Q5SW24 774 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 IL31Q6EBC2 164 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 GALNT18Q6P9A2 607 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 ZC3H7AQ8IWR0 971 aaKnown RBP11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 SLC15A4Q8N697 577 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 HM13Q8TCT9 377 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 URGCPQ8TCY9 931 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 ACE2Q9BYF1 805 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms