RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 RNF34Q969K3 372 aa18.04■□□□□ 0.48
CNOT9-204ENST00000432877 GDPD2Q9HCC8 539 aa18.04■□□□□ 0.48
CNOT9-204ENST00000432877 TMEM51Q9NW97 253 aa18.04■□□□□ 0.48
CNOT9-204ENST00000432877 GCN1Q92616 2671 aaKnown RBP18.04■□□□□ 0.48
CNOT9-204ENST00000432877 TRIM38O00635 465 aa18.03■□□□□ 0.48
CNOT9-204ENST00000432877 SIGLEC6O43699 453 aa18.03■□□□□ 0.48
CNOT9-204ENST00000432877 LETM1O95202 739 aaPredicted RBP18.03■□□□□ 0.48
CNOT9-204ENST00000432877 SNX16P57768 344 aa18.03■□□□□ 0.48
CNOT9-204ENST00000432877 AUHQ13825 339 aaKnown RBP18.03■□□□□ 0.48
CNOT9-204ENST00000432877 TTI2Q6NXR4 508 aa18.03■□□□□ 0.48
CNOT9-204ENST00000432877 SH2D3CQ8N5H7 860 aa18.03■□□□□ 0.48
CNOT9-204ENST00000432877 TMEM145Q8NBT3 493 aa18.03■□□□□ 0.48
CNOT9-204ENST00000432877 TMIEQ8NEW7 156 aa18.03■□□□□ 0.48
CNOT9-204ENST00000432877 OR4C6Q8NH72 309 aa18.03■□□□□ 0.48
CNOT9-204ENST00000432877 IFT43Q96FT9 208 aa18.03■□□□□ 0.48
CNOT9-204ENST00000432877 CCDC114Q96M63 670 aa18.03■□□□□ 0.48
CNOT9-204ENST00000432877 ZNF578Q96N58 590 aaPredicted RBP18.03■□□□□ 0.48
CNOT9-204ENST00000432877 RPRD1AQ96P16 312 aaPredicted RBP18.03■□□□□ 0.48
CNOT9-204ENST00000432877 SLC2A13Q96QE2 648 aa18.03■□□□□ 0.48
CNOT9-204ENST00000432877 FAM204AQ9H8W3 233 aa18.03■□□□□ 0.48
CNOT9-204ENST00000432877 UBE2TQ9NPD8 197 aaPredicted RBP18.03■□□□□ 0.48
CNOT9-204ENST00000432877 TBC1D30Q9Y2I9 924 aa18.03■□□□□ 0.48
CNOT9-204ENST00000432877 HSF2BPO75031 334 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 AFPP02771 609 aaKnown RBP18.02■□□□□ 0.48
CNOT9-204ENST00000432877 THEGLP0DJG4 465 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 CKMT1AP12532 417 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 DGKAP23743 735 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 METAP1P53582 386 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 MARSP56192 900 aaKnown RBP18.02■□□□□ 0.48
CNOT9-204ENST00000432877 KRT83P78385 493 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 DAB2P98082 770 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 TLE3Q04726 772 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 KCNMA1Q12791 1236 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 PDCLQ13371 301 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 C5orf22Q49AR2 442 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 DCP2Q8IU60 420 aaKnown RBP18.02■□□□□ 0.48
CNOT9-204ENST00000432877 TRIM59Q8IWR1 403 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 DEFB106AQ8N104 65 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 USP29Q9HBJ7 922 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 EVA1BQ9NVM1 165 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 DDIT4Q9NX09 232 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 VPS28Q9UK41 221 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 HS3ST2Q9Y278 367 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.02■□□□□ 0.48
CNOT9-204ENST00000432877 OR51B4Q9Y5P0 310 aa18.02■□□□□ 0.48
CNOT9-204ENST00000432877 NEMP2A6NFY4 417 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 RIOK3O14730 519 aaKnown RBP18.01■□□□□ 0.47
CNOT9-204ENST00000432877 THAP12O43422 761 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 SDC3O75056 442 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 GP1BAP07359 652 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 ALPPL2P10696 532 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 CD44P16070 742 aaKnown RBP18.01■□□□□ 0.47
CNOT9-204ENST00000432877 GNA15P30679 374 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 AKT2P31751 481 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 DUSP3P51452 185 aaPredicted RBP18.01■□□□□ 0.47
CNOT9-204ENST00000432877 CDH4P55283 916 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 TAS2R38P59533 333 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 PITX1P78337 314 aaPredicted RBP18.01■□□□□ 0.47
CNOT9-204ENST00000432877 TAF5Q15542 800 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 HORMAD1Q86X24 394 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 ERICH1Q86X53 443 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 CIR1Q86X95 450 aaPredicted RBP18.01■□□□□ 0.47
CNOT9-204ENST00000432877 ZNF248Q8NDW4 579 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 WBP1Q96G27 269 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 NOX5Q96PH1 765 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 DUSP23Q9BVJ7 150 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 INTS2Q9H0H0 1204 aaKnown RBP18.01■□□□□ 0.47
CNOT9-204ENST00000432877 PLXNA2O75051 1894 aa18.01■□□□□ 0.47
CNOT9-204ENST00000432877 SLC31A1O15431 190 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 C1QL1O75973 258 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 FGFR1OPO95684 399 aaKnown RBP18■□□□□ 0.47
CNOT9-204ENST00000432877 PRNPP04156 253 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 PRB1P04280 392 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 CLCN6P51797 869 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 UCNP55089 124 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 ACBD5Q5T8D3 534 aaPredicted RBP18■□□□□ 0.47
CNOT9-204ENST00000432877 PIP5KL1Q5T9C9 394 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 CDCP2Q5VXM1 449 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 Q6ZVU0 165 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 ZNF605Q86T29 641 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 SPACA3Q8IXA5 215 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 FAM181AQ8N9Y4 354 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 NELFBQ8WX92 580 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 PPP1R13BQ96KQ4 1090 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 C2orf49Q9BVC5 232 aaPredicted RBP18■□□□□ 0.47
CNOT9-204ENST00000432877 DYRK4Q9NR20 520 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 RRN3Q9NYV6 651 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 MAN1B1Q9UKM7 699 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 VANGL2Q9ULK5 521 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 HS3ST4Q9Y661 456 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 HS3ST3A1Q9Y663 406 aa18■□□□□ 0.47
CNOT9-204ENST00000432877 A0A1W2PQU0 124 aa17.99■□□□□ 0.47
CNOT9-204ENST00000432877 PPP1R3GB7ZBB8 358 aa17.99■□□□□ 0.47
CNOT9-204ENST00000432877 OPA1O60313 960 aa17.99■□□□□ 0.47
CNOT9-204ENST00000432877 PIAS2O75928 621 aa17.99■□□□□ 0.47
CNOT9-204ENST00000432877 DXOO77932 396 aaKnown RBP17.99■□□□□ 0.47
CNOT9-204ENST00000432877 HNRNPA2B1P22626 353 aaKnown RBP17.99■□□□□ 0.47
CNOT9-204ENST00000432877 CHRNA3P32297 505 aa17.99■□□□□ 0.47
CNOT9-204ENST00000432877 PCBP4P57723 403 aaKnown RBP17.99■□□□□ 0.47
CNOT9-204ENST00000432877 CCDC173Q0VFZ6 552 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms