RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 PAF1Q8N7H5 531 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 TSPYL6Q8N831 410 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 NAXEQ8NCW5 288 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 CEP70Q8NHQ1 597 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 SCAMP5Q8TAC9 235 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 WIPF2Q8TF74 440 aaPredicted RBP2.36□□□□□ -2.03
CDC40-204ENST00000431461 NR4A3Q92570 626 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 CELF1Q92879 486 aaKnown RBP2.36□□□□□ -2.03
CDC40-204ENST00000431461 MAP4K1Q92918 833 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 TRMT61AQ96FX7 289 aaKnown RBP2.36□□□□□ -2.03
CDC40-204ENST00000431461 FCRL5Q96RD9 977 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 ELOVL1Q9BW60 279 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 NPLQ9BXD5 320 aaPredicted RBP2.36□□□□□ -2.03
CDC40-204ENST00000431461 FAM234AQ9H0X4 552 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 JMJD4Q9H9V9 463 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 WASH6PQ9NQA3 447 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 TMEM184CQ9NVA4 438 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 PPP1R14DQ9NXH3 145 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 ASAP1Q9ULH1 1129 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 VPS4AQ9UN37 437 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 PCDHB2Q9Y5E7 798 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 PCDHGB3Q9Y5G1 929 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 SLC4A4Q9Y6R1 1079 aa2.36□□□□□ -2.03
CDC40-204ENST00000431461 LMTK3Q96Q04 1460 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 KCNJ18B7U540 433 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 NCAM2O15394 837 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 HOXC11O43248 304 aaPredicted RBP2.35□□□□□ -2.03
CDC40-204ENST00000431461 STRNO43815 780 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 TULP3O75386 442 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 WNT1P04628 370 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 MMP3P08254 477 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 MYZAPP0CAP1 466 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 CTSAP10619 480 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 CYP4B1P13584 511 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 PKMP14618 531 aaKnown RBP2.35□□□□□ -2.03
CDC40-204ENST00000431461 TBXAS1P24557 533 aaPredicted RBP2.35□□□□□ -2.03
CDC40-204ENST00000431461 SKIV2L2P42285 1042 aaKnown RBP2.35□□□□□ -2.03
CDC40-204ENST00000431461 MAPK9P45984 424 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 PNLIPRP1P54315 467 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 SLC37A1P57057 533 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 FOXL2P58012 376 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 CHRNDQ07001 517 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 CDK18Q07002 472 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 MTA1Q13330 715 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 SLC14A1Q13336 389 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 STIM1Q13586 685 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 KPNB1Q14974 876 aaKnown RBP2.35□□□□□ -2.03
CDC40-204ENST00000431461 TUBB8Q3ZCM7 444 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 LRRC24Q50LG9 513 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 CBWD5Q5RIA9 395 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 DAB2IPQ5VWQ8 1189 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 FBXL22Q6P050 247 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 ZNF474Q6S9Z5 364 aaPredicted RBP2.35□□□□□ -2.03
CDC40-204ENST00000431461 DHRS13Q6UX07 377 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 C16orf89Q6UX73 402 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 MMS22LQ6ZRQ5 1243 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 FAM57BQ71RH2 274 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 TRAPPC11Q7Z392 1133 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 TMC8Q8IU68 726 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 HERC6Q8IVU3 1022 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.35□□□□□ -2.03
CDC40-204ENST00000431461 ZDHHC23Q8IYP9 409 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 PELI3Q8N2H9 469 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 ZNF548Q8NEK5 533 aaPredicted RBP2.35□□□□□ -2.03
CDC40-204ENST00000431461 PPHLN1Q8NEY8 458 aaKnown RBP2.35□□□□□ -2.03
CDC40-204ENST00000431461 ZMIZ2Q8NF64 920 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 TNIP2Q8NFZ5 429 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 ZCCHC10Q8TBK6 192 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 TMEM255BQ8WV15 326 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 HERVK_113Q902F9 699 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 ARRDC3Q96B67 414 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 ZNF333Q96JL9 665 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 UBXN10Q96LJ8 280 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 TEFMQ96QE5 360 aaKnown RBP2.35□□□□□ -2.03
CDC40-204ENST00000431461 IFT27Q9BW83 186 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 CADM1Q9BY67 442 aaKnown RBP2.35□□□□□ -2.03
CDC40-204ENST00000431461 TRIM31Q9BZY9 425 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 ABHD16BQ9H3Z7 469 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 RIC8AQ9NPQ8 531 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 ALKBH4Q9NXW9 302 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 HCN3Q9P1Z3 774 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 FEM1BQ9UK73 627 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 RAB21Q9UL25 225 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 TBX20Q9UMR3 447 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 DHDHQ9UQ10 334 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 OSGIN2Q9Y236 505 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 B3GNT3Q9Y2A9 372 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 DTX4Q9Y2E6 619 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 GPR52Q9Y2T5 361 aa2.35□□□□□ -2.03
CDC40-204ENST00000431461 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.34□□□□□ -2.03
CDC40-204ENST00000431461 C17orf102A2RUQ5 167 aa2.34□□□□□ -2.03
CDC40-204ENST00000431461 GAGE10A6NGK3 116 aa2.34□□□□□ -2.03
CDC40-204ENST00000431461 FAM90A20PA6NIJ5 464 aa2.34□□□□□ -2.03
CDC40-204ENST00000431461 LACTBL1A8MY62 500 aa2.34□□□□□ -2.03
CDC40-204ENST00000431461 GRM8O00222 908 aa2.34□□□□□ -2.03
CDC40-204ENST00000431461 EIF3FO00303 357 aaPredicted RBP2.34□□□□□ -2.03
CDC40-204ENST00000431461 TSPAN4O14817 238 aa2.34□□□□□ -2.03
CDC40-204ENST00000431461 MSI1O43347 362 aaKnown RBP2.34□□□□□ -2.03
CDC40-204ENST00000431461 GRID2O43424 1007 aa2.34□□□□□ -2.03
CDC40-204ENST00000431461 SLC28A2O43868 658 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms