RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 CYP3A7-CYP3A51PA0A087WV96 503 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 PATE3B3GLJ2 98 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 ERVV-1B6SEH8 477 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 TMEM232C9JQI7 657 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 H0YGN5 161 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 SPTLC2O15270 562 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 FOXS1O43638 330 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 PLOD3O60568 738 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 TIPRLO75663 272 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 BBOX1O75936 387 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 HEXIM1O94992 359 aaKnown RBP4.43□□□□□ -1.7
HMGB3-203ENST00000430118 ZFPL1O95159 310 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 CCNDBP1O95273 360 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 LAMP2P13473 410 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 CHN1P15882 459 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 CYP3A7P24462 503 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 ADRA1DP25100 572 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 PAFAH1B1P43034 410 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 JAG1P78504 1218 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 GOLGA8FQ08AF8 430 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 PDCLQ13371 301 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 DNASE1L3Q13609 305 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 FAM187BQ17R55 369 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 GEN1Q17RS7 908 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 PARP10Q53GL7 1025 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 TMEM63BQ5T3F8 832 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 HAUS3Q68CZ6 603 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 ACSM6Q6P461 480 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 CCDC129Q6ZRS4 1044 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 KRT74Q7RTS7 529 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 GALNT5Q7Z7M9 940 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 METTL25Q8N6Q8 603 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 POU5F2Q8N7G0 328 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 ZNF366Q8N895 744 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 CREB3L4Q8TEY5 395 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 NPIPB3Q92617 1050 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 NSUN4Q96CB9 384 aaKnown RBP4.43□□□□□ -1.7
HMGB3-203ENST00000430118 ACTRT3Q9BYD9 372 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 PRKRIP1Q9H875 184 aaPredicted RBP4.43□□□□□ -1.7
HMGB3-203ENST00000430118 TRPM5Q9NZQ8 1165 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 HCN3Q9P1Z3 774 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 CD207Q9UJ71 328 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 GABRQQ9UN88 632 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 CNPY2Q9Y2B0 182 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 ABCC4O15439 1325 aa4.43□□□□□ -1.7
HMGB3-203ENST00000430118 COL1A1P02452 1464 aaPredicted RBP4.43□□□□□ -1.7
HMGB3-203ENST00000430118 LAMB4A4D0S4 1761 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 TBC1D3DA0A087WVF3 549 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 TBC1D3IA0A087WXS9 549 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 TBC1D3EA0A087X179 549 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 TBC1D3KA0A087X1G2 549 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 A1L4Q6 167 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 TBC1D3BA6NDS4 549 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 TBC1D3FA6NER0 549 aaPredicted RBP4.42□□□□□ -1.7
HMGB3-203ENST00000430118 TBC1D3LB9A6J9 549 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 PSMD14O00487 310 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 GPR42O15529 346 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 TMPRSS11DO60235 418 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 CDKL5O76039 1030 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 URI1O94763 535 aaPredicted RBP4.42□□□□□ -1.7
HMGB3-203ENST00000430118 TJP3O95049 919 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 NXPH3O95157 252 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 DLDP09622 509 aaKnown RBP4.42□□□□□ -1.7
HMGB3-203ENST00000430118 TBC1D3HP0C7X1 549 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 CPA1P15085 419 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 CAPN2P17655 700 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 IGFBP2P18065 325 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 GKP32189 559 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 GRK5P34947 590 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 HOXD12P35452 270 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 ARL3P36405 182 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 CENPFP49454 3210 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 RCAN1P53805 252 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 RPL15P61313 204 aaKnown RBP4.42□□□□□ -1.7
HMGB3-203ENST00000430118 SUMO2P61956 95 aaKnown RBP4.42□□□□□ -1.7
HMGB3-203ENST00000430118 PTP4A2Q12974 167 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 MAMLD1Q13495 774 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 CUL4AQ13619 759 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 PKN1Q16512 942 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 MTHFSDQ2M296 383 aaKnown RBP4.42□□□□□ -1.7
HMGB3-203ENST00000430118 CCDC96Q2M329 555 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 VMACQ2NL98 169 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 HS1BP3Q53T59 392 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 TBC1D3GQ6DHY5 549 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 TBC1D3CQ6IPX1 549 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 WDR93Q6P2C0 686 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 PDXDC1Q6P996 788 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 TMEM88Q6PEY1 159 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 Q6ZRM9 215 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 H1FNTQ75WM6 255 aaPredicted RBP4.42□□□□□ -1.7
HMGB3-203ENST00000430118 CAND1Q86VP6 1230 aaKnown RBP4.42□□□□□ -1.7
HMGB3-203ENST00000430118 CHD1LQ86WJ1 897 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 DIS3L2Q8IYB7 885 aaKnown RBP4.42□□□□□ -1.7
HMGB3-203ENST00000430118 TBC1D3Q8IZP1 549 aaPredicted RBP4.42□□□□□ -1.7
HMGB3-203ENST00000430118 CNPY4Q8N129 248 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 GALNT4Q8N4A0 578 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 LSMEM1Q8N8F7 131 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 PNPLA1Q8N8W4 532 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 B3GALNT2Q8NCR0 500 aa4.42□□□□□ -1.7
HMGB3-203ENST00000430118 OR52L2PQ8NGH6 319 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms