RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 TXLNGQ9NUQ3 528 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 E9PAM4 449 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 FLT3P36888 993 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 PTPN9P43378 593 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 GPR15P49685 360 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 CSE1LP55060 971 aaKnown RBP13.16□□□□□ -0.3
PTCH1-207ENST00000429896 TTLL9Q3SXZ7 439 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 RFWD3Q6PCD5 774 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 COLGALT2Q8IYK4 626 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 SERPINI1Q99574 410 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 TRIM15Q9C019 465 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 SENP1Q9P0U3 644 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 MYH4Q9Y623 1939 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 GYG2O15488 501 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 DNAJC8O75937 253 aaPredicted RBP13.16□□□□□ -0.3
PTCH1-207ENST00000429896 HTR7P34969 479 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 GRSF1Q12849 480 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTCH1-207ENST00000429896 KCTD13Q8WZ19 329 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 SRPK1Q96SB4 655 aaKnown RBP13.16□□□□□ -0.3
PTCH1-207ENST00000429896 H2AFXP16104 143 aaPredicted RBP13.16□□□□□ -0.3
PTCH1-207ENST00000429896 CENPAP49450 140 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 MORF4L2Q15014 288 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 MTSS1LQ765P7 747 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 NOCTQ9UK39 431 aaKnown RBP13.16□□□□□ -0.3
PTCH1-207ENST00000429896 ZFP37Q9Y6Q3 630 aaPredicted RBP13.16□□□□□ -0.3
PTCH1-207ENST00000429896 HEATR9A2RTY3 570 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 STBD1O95210 358 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 IL1BP01584 269 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 DNTTP04053 509 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 HNRNPA1P09651 372 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTCH1-207ENST00000429896 ERCC2P18074 760 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 CDH4P55283 916 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 LRRC74AQ0VAA2 488 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 C1orf146Q5VVC0 180 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 NPNTQ6UXI9 565 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 PCDHGC5Q9Y5F6 944 aa13.16□□□□□ -0.3
PTCH1-207ENST00000429896 FOSL2P15408 326 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 NLRP9Q7RTR0 991 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 GLT6D1Q7Z4J2 308 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 HNRNPLLQ8WVV9 542 aaKnown RBP13.15□□□□□ -0.3
PTCH1-207ENST00000429896 CASD1Q96PB1 797 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 NSUN3Q9H649 340 aaKnown RBP13.15□□□□□ -0.3
PTCH1-207ENST00000429896 PPCSQ9HAB8 311 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 RAD18Q9NS91 495 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 WHRNQ9P202 907 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 ANGPTL2Q9UKU9 493 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 DOCK1Q14185 1865 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 PAPSS1O43252 624 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-207ENST00000429896 GLP2RO95838 553 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 RBL1P28749 1068 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 LRRC8EQ6NSJ5 796 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 CEP68Q76N32 757 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 SCOCQ9UIL1 159 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 ZFP69BQ9UJL9 534 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 APOBEC2Q9Y235 224 aaKnown RBP13.15□□□□□ -0.3
PTCH1-207ENST00000429896 MAGEB16A2A368 324 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 KCNU1A8MYU2 1149 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 MSH3P20585 1137 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 SPARCL1Q14515 664 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 ATP13A4Q4VNC1 1196 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 CLPBQ9H078 707 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 CCNB1P14635 433 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 PARP15Q460N3 678 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 ACAD11Q709F0 780 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 TRMT61BQ9BVS5 477 aaKnown RBP13.15□□□□□ -0.3
PTCH1-207ENST00000429896 TM6SF2Q9BZW4 377 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 MAFFQ9ULX9 164 aa13.15□□□□□ -0.3
PTCH1-207ENST00000429896 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.15□□□□□ -0.31
PTCH1-207ENST00000429896 YJEFN3A6XGL0 299 aa13.15□□□□□ -0.31
PTCH1-207ENST00000429896 ZBTB42B2RXF5 422 aa13.15□□□□□ -0.31
PTCH1-207ENST00000429896 E7ENQ6 273 aa13.15□□□□□ -0.31
PTCH1-207ENST00000429896 MEFVO15553 781 aaPredicted RBP13.15□□□□□ -0.31
PTCH1-207ENST00000429896 GJB5O95377 273 aa13.15□□□□□ -0.31
PTCH1-207ENST00000429896 RHOQP17081 205 aa13.15□□□□□ -0.31
PTCH1-207ENST00000429896 CES1P23141 567 aa13.15□□□□□ -0.31
PTCH1-207ENST00000429896 PBLDP30039 288 aaPredicted RBP13.15□□□□□ -0.31
PTCH1-207ENST00000429896 TEAD2Q15562 447 aa13.15□□□□□ -0.31
PTCH1-207ENST00000429896 ANKRD33Q7Z3H0 272 aa13.15□□□□□ -0.31
PTCH1-207ENST00000429896 PLEKHO2Q8TD55 490 aa13.15□□□□□ -0.31
PTCH1-207ENST00000429896 PAK6Q9NQU5 681 aaPredicted RBP13.15□□□□□ -0.31
PTCH1-207ENST00000429896 TRMT6Q9UJA5 497 aaKnown RBP13.15□□□□□ -0.31
PTCH1-207ENST00000429896 C1RP00736 705 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 GFAPP14136 432 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 DGKGP49619 791 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 CAP1Q01518 475 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 FNIP1Q8TF40 1166 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 TOP1MTQ969P6 601 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 TWNKQ96RR1 684 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 NAT9Q9BTE0 207 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-207ENST00000429896 BACE2Q9Y5Z0 518 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 NRXN2Q9P2S2 1712 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 NPY2RP49146 381 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 MMRN1Q13201 1228 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 EFTUD2Q15029 972 aaKnown RBP eCLIP13.14□□□□□ -0.31
PTCH1-207ENST00000429896 PARP6Q2NL67 630 aa13.14□□□□□ -0.31
PTCH1-207ENST00000429896 ZCCHC2Q9C0B9 1178 aaKnown RBP13.14□□□□□ -0.31
PTCH1-207ENST00000429896 PSMC3IPQ9P2W1 217 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-207ENST00000429896 SCML2Q9UQR0 700 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms