RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 UBIAD1Q9Y5Z9 338 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 COPG1Q9Y678 874 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 GOLGA8TH3BQL2 631 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 ZNF701M0R085 212 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 APOL1O14791 398 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 HDAC3O15379 428 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 KDM1AO60341 852 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 PIGNO95427 931 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 PABPC1P11940 636 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 DCKP27707 260 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 CDH5P33151 784 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 RHDQ02161 417 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 CA9Q16790 459 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 FAM47CQ5HY64 1035 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 PITRM1Q5JRX3 1037 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 KCTD8Q6ZWB6 473 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 SIX6OS1Q8N1H7 587 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 CYGBQ8WWM9 190 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 HPS1Q92902 700 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 TMEM143Q96AN5 459 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 SGF29Q96ES7 293 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 MASTLQ96GX5 879 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 PIWIL1Q96J94 861 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 ZNF341Q9BYN7 854 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 ZBTB26Q9HCK0 441 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 NXF1Q9UBU9 619 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 FBXO40Q9UH90 709 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 PCDHGA7Q9Y5G6 932 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 ST14Q9Y5Y6 855 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 PRORSD1PA6NEY8 169 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 TRIM64CA6NLI5 447 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 TMEM233B4DJY2 109 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 DLGAP1O14490 977 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 TPST1O60507 370 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 ATG7O95352 703 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 LDHAP00338 332 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 MAGEA6P43360 314 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 YWHAEP62258 255 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 GBE1Q04446 702 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 TNK2Q07912 1038 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 GALNT2Q10471 571 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 NFATC3Q12968 1075 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 KRT27Q7Z3Y8 459 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 CPXCR1Q8N123 301 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 FNIP1Q8TF40 1166 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 CDKL2Q92772 493 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 RTP4Q96DX8 246 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 ADPGKQ9BRR6 497 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 MAGEB5Q9BZ81 275 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 COA1Q9GZY4 146 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 TPK1Q9H3S4 243 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 ZNF385DQ9H6B1 395 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 SOX17Q9H6I2 414 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 SIAEQ9HAT2 523 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 ZFYVE28Q9HCC9 887 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 TXNDC16Q9P2K2 825 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 SEPT9Q9UHD8 586 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 DAPK2Q9UIK4 370 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 CCPG1Q9ULG6 757 aa11.28□□□□□ -0.6
SEMA4D-209ENST00000429836 FAM155AB1AL88 458 aaPredicted RBP11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 DYNC1LI2O43237 492 aaPredicted RBP11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 TRIM13O60858 407 aa11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 ENDOD1O94919 500 aa11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 JAK1P23458 1154 aa11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 MAP4P27816 1152 aaKnown RBP11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 CDH8P55286 799 aa11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 KCNJ8Q15842 424 aa11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 ARL13AQ5H913 290 aaPredicted RBP11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 DEPDC1Q5TB30 811 aa11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 ACVR1CQ8NER5 493 aa11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 TAAR1Q96RJ0 339 aa11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 HERC2P3Q9BVR0 1158 aa11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 CEP41Q9BYV8 373 aa11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 ZC3H12CQ9C0D7 883 aaKnown RBP11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 NIF3L1Q9GZT8 377 aa11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 IPO11Q9UI26 975 aaKnown RBP11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 PCDHGC3Q9UN70 934 aa11.27□□□□□ -0.6
SEMA4D-209ENST00000429836 BCLAF3A2AJT9 711 aaKnown RBP11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 LRRIQ4A6NIV6 560 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 ALDH1A2O94788 518 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 ESRRBO95718 433 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 TFEBP19484 476 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 MATN1P21941 496 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 RPL14P50914 215 aaKnown RBP11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 RPS6P62753 249 aaKnown RBP11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 OLIG2Q13516 323 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 INSCQ1MX18 579 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 GLRA4Q5JXX5 417 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 TRAPPC3LQ5T215 181 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 ZBTB33Q86T24 672 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 CADM3Q8N126 398 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 CPSF7Q8N684 471 aaKnown RBP11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 SLC4A11Q8NBS3 891 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 CANT1Q8WVQ1 401 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 DOK1Q99704 481 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 MTG1Q9BT17 334 aaPredicted RBP11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 ADI1Q9BV57 179 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 ASNSD1Q9NWL6 643 aa11.27□□□□□ -0.61
SEMA4D-209ENST00000429836 TUBA8Q9NY65 449 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms