RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 VPS33BQ9H267 617 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 KANSL2Q9H9L4 492 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 DCP1AQ9NPI6 582 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 TFCP2L1Q9NZI6 479 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 SNX7Q9UNH6 387 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 PCDHAC2Q9Y5I4 1007 aa9.03□□□□□ -0.96
CDC42BPA-206ENST00000429440 CCDC194A0A1B0GVG4 234 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 FAM170AA1A519 330 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 TRPC5OSA6NMA1 111 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 DNALI1O14645 258 aaPredicted RBP9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 RAD51BO15315 384 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 NCAM2O15394 837 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 HMGN1P05114 100 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 OR52Z1P0C646 297 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 CD40LGP29965 261 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 SSTR3P32745 418 aaPredicted RBP9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 PRAMEP78395 509 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 MMRN1Q13201 1228 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 KRR1Q13601 381 aaKnown RBP9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 SLC12A1Q13621 1099 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 MESDQ14696 234 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 PIGGQ5H8A4 983 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 ZNF544Q6NX49 715 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 C16orf89Q6UX73 402 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 FBXO11Q86XK2 927 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 CATSPER3Q86XQ3 398 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 ZFPM1Q8IX07 1006 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 PIK3C3Q8NEB9 887 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 SEPT1Q8WYJ6 367 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 GLT1D1Q96MS3 346 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 RPRD1AQ96P16 312 aaPredicted RBP9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 EBF4Q9BQW3 602 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 MTG1Q9BT17 334 aaPredicted RBP9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 ADAMTS10Q9H324 1103 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 DHX33Q9H6R0 707 aaKnown RBP9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 RAVER2Q9HCJ3 691 aaKnown RBP9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 ACP6Q9NPH0 428 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 SYBUQ9NX95 663 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 MTRRQ9UBK8 725 aa9.02□□□□□ -0.96
CDC42BPA-206ENST00000429440 CDK5RAP2Q96SN8 1893 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 M0R2N6 131 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 ADAMTS3O15072 1205 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 KCNK2O95069 426 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 CD4P01730 458 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 ASNSP08243 561 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 CYP2D6P10635 497 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 COX4I1P13073 169 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 YBX3P16989 372 aaKnown RBP eCLIP9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 PSMC2P35998 433 aaKnown RBP9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 HARS2P49590 506 aaKnown RBP9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 PPP5CP53041 499 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 NME5P56597 212 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 AP3B2Q13367 1082 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 IRF5Q13568 498 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 MORF4L2Q15014 288 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 BRMS1LQ5PSV4 323 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 FAM26FQ5R3K3 315 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 ATAD3CQ5T2N8 411 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 FAM182BQ5T319 152 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 DCUN1D2Q6PH85 259 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 BEND5Q7L4P6 421 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 FAM83AQ86UY5 434 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 SNX32Q86XE0 403 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 CTAGE3PQ8IX95 158 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 C12orf56Q8IXR9 622 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 LEMD2Q8NC56 503 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 PSD4Q8NDX1 1056 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 CMASQ8NFW8 434 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 DCAKDQ8WVC6 231 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 DACT3Q96B18 629 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 MAGED4Q96JG8 741 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 UHRF1Q96T88 793 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 GDF15Q99988 308 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 USB1Q9BQ65 265 aaKnown RBP9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 ANO3Q9BYT9 981 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZC3H12CQ9C0D7 883 aaKnown RBP9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 KCTD10Q9H3F6 313 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 CD320Q9NPF0 282 aa9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 AJAP1Q9UKB5 411 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 CPSF3Q9UKF6 684 aaKnown RBP9.02□□□□□ -0.97
CDC42BPA-206ENST00000429440 TOR1AO14656 332 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 NDUFS2O75306 463 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 KRT37O76014 449 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 DDAH1O94760 285 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 CDK14O94921 469 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 KCNH1O95259 989 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 GH2P01242 217 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 XRCC5P13010 732 aaKnown RBP9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 VEGFAP15692 232 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 TSHRP16473 764 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 CYP3A5P20815 502 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 HTR2BP41595 481 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 HLCSP50747 726 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 GPR85P60893 370 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 ARCQ7LC44 396 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 DYMQ7RTS9 669 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 NDUFAF2Q8N183 169 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 EFCAB3Q8N7B9 438 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 BHLHE22Q8NFJ8 381 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLC22A8Q8TCC7 542 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms