RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 TSGA13Q96PP4 275 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 MYADMQ96S97 322 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 WDR83Q9BRX9 315 aaKnown RBP9.08□□□□□ -0.96
SMC6-204ENST00000428868 TXLNGYQ9BZA5 131 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 ETNK1Q9HBU6 452 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 LRRC4CQ9HCJ2 640 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 RAB6BQ9NRW1 208 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 PAK5Q9P286 719 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 FEZ2Q9UHY8 353 aaPredicted RBP9.08□□□□□ -0.96
SMC6-204ENST00000428868 IPO11Q9UI26 975 aaKnown RBP9.08□□□□□ -0.96
SMC6-204ENST00000428868 ANAPC5Q9UJX4 755 aa9.08□□□□□ -0.96
SMC6-204ENST00000428868 TPX2Q9ULW0 747 aaKnown RBP9.08□□□□□ -0.96
SMC6-204ENST00000428868 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.07□□□□□ -0.96
SMC6-204ENST00000428868 E2F8A0AVK6 867 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 ARHGAP42A6NI28 874 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 MUSKO15146 869 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 ZBTB24O43167 697 aaPredicted RBP9.07□□□□□ -0.96
SMC6-204ENST00000428868 SNAP91O60641 907 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 CLDN11O75508 207 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 LUC7L3O95232 432 aaKnown RBP9.07□□□□□ -0.96
SMC6-204ENST00000428868 TCF3P15923 654 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 MX2P20592 715 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 IGFBP4P22692 258 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 CCNCP24863 283 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 MCM3P25205 808 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 STIP1P31948 543 aaKnown RBP9.07□□□□□ -0.96
SMC6-204ENST00000428868 CD70P32970 193 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 CSKP41240 450 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 GRIA1P42261 906 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 TNNT3P45378 269 aaPredicted RBP9.07□□□□□ -0.96
SMC6-204ENST00000428868 IFI35P80217 286 aaPredicted RBP9.07□□□□□ -0.96
SMC6-204ENST00000428868 GNA12Q03113 381 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 SLC10A7Q0GE19 358 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 CALCOCO2Q13137 446 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 SPARCL1Q14515 664 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 FASTKD3Q14CZ7 662 aaKnown RBP9.07□□□□□ -0.96
SMC6-204ENST00000428868 POLD3Q15054 466 aaPredicted RBP9.07□□□□□ -0.96
SMC6-204ENST00000428868 MSS51Q4VC12 460 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 FNBP1LQ5T0N5 605 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 RNF219Q5W0B1 726 aaPredicted RBP9.07□□□□□ -0.96
SMC6-204ENST00000428868 RNF43Q68DV7 783 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 ARHGEF18Q6ZSZ5 1173 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 BZW1Q7L1Q6 419 aaKnown RBP9.07□□□□□ -0.96
SMC6-204ENST00000428868 TMC3Q7Z5M5 1100 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 CCDC25Q86WR0 208 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 ZNF354CQ86Y25 554 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 APCDD1Q8J025 514 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 AGGF1Q8N302 714 aaeCLIP9.07□□□□□ -0.96
SMC6-204ENST00000428868 PGBD5Q8N414 524 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 DDI1Q8WTU0 396 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 HNRNPLLQ8WVV9 542 aaKnown RBP9.07□□□□□ -0.96
SMC6-204ENST00000428868 MAML1Q92585 1016 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 CAVIN3Q969G5 261 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 PPP2R3CQ969Q6 453 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 LRRC45Q96CN5 670 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 TMA16Q96EY4 203 aaKnown RBP9.07□□□□□ -0.96
SMC6-204ENST00000428868 ALG14Q96F25 216 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 ZFYVE19Q96K21 471 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 MSLNLQ96KJ4 702 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 LMLNQ96KR4 655 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 ASB16Q96NS5 453 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 AGAP3Q96P47 875 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 FMO2Q99518 471 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 IL12RB2Q99665 862 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 MLPHQ9BV36 600 aaPredicted RBP9.07□□□□□ -0.96
SMC6-204ENST00000428868 PLA2G2FQ9BZM2 168 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 EPB41L4BQ9H329 900 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 POMKQ9H5K3 350 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 PDFQ9HBH1 243 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 ARGLU1Q9NWB6 273 aaPredicted RBP9.07□□□□□ -0.96
SMC6-204ENST00000428868 KLHL8Q9P2G9 620 aaPredicted RBP9.07□□□□□ -0.96
SMC6-204ENST00000428868 TBC1D30Q9Y2I9 924 aa9.07□□□□□ -0.96
SMC6-204ENST00000428868 PLXNB3Q9ULL4 1909 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 CKAP5Q14008 2032 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.06□□□□□ -0.96
SMC6-204ENST00000428868 SOBPA7XYQ1 873 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 H0Y626 953 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 TRIM24O15164 1050 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 MATN3O15232 486 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 NCAM2O15394 837 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 PRAMEF11O60813 436 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 ERLIN1O75477 346 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 CD160O95971 181 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 CYP17A1P05093 508 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 CCNB1P14635 433 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 ARSAP15289 507 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 ITIH2P19823 946 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 COL9A1P20849 921 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 SP100P23497 879 aaPredicted RBP9.06□□□□□ -0.96
SMC6-204ENST00000428868 ETFBP38117 255 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 MAXP61244 160 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 ARF5P84085 180 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 LMAN2Q12907 356 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 MTA1Q13330 715 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 ZNF177Q13360 481 aaPredicted RBP9.06□□□□□ -0.96
SMC6-204ENST00000428868 SEMA5AQ13591 1074 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 COL19A1Q14993 1142 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 PARP15Q460N3 678 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 TEX44Q53QW1 395 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 LY6G5CQ5SRR4 150 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms