RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 FNTBP49356 437 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 ZNF135P52742 658 aaPredicted RBP14.9□□□□□ -0.02
SGCE-204ENST00000428696 DMWDQ09019 674 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 DPYSL3Q14195 570 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 PTPRNQ16849 979 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 ANKRD20A8PQ5CZ79 823 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 KAZNQ674X7 775 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 RETSATQ6NUM9 610 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 KIAA1324Q6UXG2 1013 aaKnown RBP14.9□□□□□ -0.02
SGCE-204ENST00000428696 PEX26Q7Z412 305 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 MAML2Q8IZL2 1156 aaPredicted RBP14.9□□□□□ -0.02
SGCE-204ENST00000428696 ARHGEF2Q92974 986 aaKnown RBP14.9□□□□□ -0.02
SGCE-204ENST00000428696 PSMB7Q99436 277 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 PRRX2Q99811 253 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 TPSD1Q9BZJ3 242 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 SLC39A8Q9C0K1 460 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 SLC6A17Q9H1V8 727 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 ETNK2Q9NVF9 386 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 DDX56Q9NY93 547 aaKnown RBP14.9□□□□□ -0.02
SGCE-204ENST00000428696 ZNF212Q9UDV6 495 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 SUN2Q9UH99 717 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 RAPGEFL1Q9UHV5 662 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 AMFRQ9UKV5 643 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 INVSQ9Y283 1065 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 PPP2R2CQ9Y2T4 447 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 SP9P0CG40 484 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 PAPOLAP51003 745 aaKnown RBP14.89□□□□□ -0.03
SGCE-204ENST00000428696 NUBP1P53384 320 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 NRLP54845 237 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 DYNLT1P63172 113 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 CCDC173Q0VFZ6 552 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 DPYSQ14117 519 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 DLG2Q15700 870 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 PARP15Q460N3 678 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 LRRC38Q5VT99 294 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 RFX6Q8HWS3 928 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 SYCE1Q8N0S2 351 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 RYBPQ8N488 228 aaPredicted RBP14.89□□□□□ -0.03
SGCE-204ENST00000428696 DCAF4L2Q8NA75 395 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 ATOH1Q92858 354 aaPredicted RBP14.89□□□□□ -0.03
SGCE-204ENST00000428696 PDLIM2Q96JY6 352 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 MRGPRX3Q96LB0 322 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 NOL6Q9H6R4 1146 aaKnown RBP14.89□□□□□ -0.03
SGCE-204ENST00000428696 TRMT1Q9NXH9 659 aaKnown RBP14.89□□□□□ -0.03
SGCE-204ENST00000428696 FBXO4Q9UKT5 387 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 ACTL7AQ9Y615 435 aa14.89□□□□□ -0.03
SGCE-204ENST00000428696 A0A1W2PQF6 199 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 ARHGAP42A6NI28 874 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 WASH4PA8MWX3 477 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 K7ESF4 209 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 KDELR3O43731 214 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 ZRANB2O95218 330 aaKnown RBP eCLIP14.88□□□□□ -0.03
SGCE-204ENST00000428696 VAV1P15498 845 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 IL4RP24394 825 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 NDST2P52849 883 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 YBEYP58557 167 aaPredicted RBP14.88□□□□□ -0.03
SGCE-204ENST00000428696 UMODL1-AS1Q8N2C9 162 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 CAMKK1Q8N5S9 505 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 RNF10Q8N5U6 811 aaKnown RBP14.88□□□□□ -0.03
SGCE-204ENST00000428696 NPWQ8N729 165 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 PRSS33Q8NF86 280 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 PCDH19Q8TAB3 1148 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 GANCQ8TET4 914 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 KRT35Q92764 455 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 GABRG3Q99928 467 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 KLC2Q9H0B6 622 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 TNKS2Q9H2K2 1166 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 TMEM245Q9H330 911 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 KCNF1Q9H3M0 494 aa14.88□□□□□ -0.03
SGCE-204ENST00000428696 PACSIN2Q9UNF0 486 aaPredicted RBP14.88□□□□□ -0.03
SGCE-204ENST00000428696 AXIN1O15169 862 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 SMAD6O43541 496 aaKnown RBP14.87□□□□□ -0.03
SGCE-204ENST00000428696 PSTPIP1O43586 416 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 SIN3BO75182 1162 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 MAP3K6O95382 1288 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 KRT10P13645 584 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 RECQLP46063 649 aaPredicted RBP14.87□□□□□ -0.03
SGCE-204ENST00000428696 MARCKSL1P49006 195 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 ARSEP51690 589 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 SERINC3Q13530 473 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 CCDC181Q5TID7 509 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 MAMSTRQ6ZN01 415 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 TMPRSS6Q8IU80 811 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 TP53INP2Q8IXH6 220 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 RCOR2Q8IZ40 523 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 LZTR1Q8N653 840 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 TSC1Q92574 1164 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 RNF157Q96PX1 679 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 ZNF670Q9BS34 389 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 ACE2Q9BYF1 805 aaPredicted RBP14.87□□□□□ -0.03
SGCE-204ENST00000428696 PRDM16Q9HAZ2 1276 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 SP110Q9HB58 689 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 PRSS16Q9NQE7 514 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 PRMT8Q9NR22 394 aaPredicted RBP14.87□□□□□ -0.03
SGCE-204ENST00000428696 RCOR3Q9P2K3 495 aaPredicted RBP14.87□□□□□ -0.03
SGCE-204ENST00000428696 FCF1Q9Y324 198 aaKnown RBP14.87□□□□□ -0.03
SGCE-204ENST00000428696 FARP1Q9Y4F1 1045 aaPredicted RBP14.87□□□□□ -0.03
SGCE-204ENST00000428696 HEY1Q9Y5J3 304 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 R4GN57 208 aa14.87□□□□□ -0.03
SGCE-204ENST00000428696 WDFY4Q6ZS81 3184 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms