RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 SMAD2Q15796 467 aaKnown RBP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 TRIM71Q2Q1W2 868 aaKnown RBP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 XKR4Q5GH76 650 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 KCNT1Q5JUK3 1230 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 ABHD15Q6UXT9 468 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 C11orf74Q86VG3 221 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 NEUROD4Q9HD90 331 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 MIEF1Q9NQG6 463 aa7.37□□□□□ -1.23
CNOT4-206ENST00000428680 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.37□□□□□ -1.238e-7■■■□□ 19.2
CNOT4-206ENST00000428680 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.37□□□□□ -1.23
CNOT4-206ENST00000428680 A6NCN8 305 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 MEFVO15553 781 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 GUCY1B2O75343 617 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 STBD1O95210 358 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 KLK3P07288 261 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 HSPA9P38646 679 aaKnown RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 ALDH9A1P49189 494 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 CCR4P51679 360 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 SHROOM1Q2M3G4 852 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 TMEM63BQ5T3F8 832 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 BROXQ5VW32 411 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 COG1Q8WTW3 980 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 ZNF606Q8WXB4 792 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 KXD1Q9BQD3 176 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 SYTL2Q9HCH5 934 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 UBP1Q9NZI7 540 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 OR12D3Q9UGF7 316 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 A0A0U1RQF3 1178 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 ZBTB39O15060 712 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 FGF10O15520 208 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 PSMD10O75832 226 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 ASLP04424 464 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 DDX6P26196 483 aaKnown RBP eCLIP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 CLCNKBP51801 687 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 ZKSCAN8Q15776 578 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 FAM83EQ2M2I3 478 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 RABEPKQ7Z6M1 372 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 SLC44A2Q8IWA5 706 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 SPATA20Q8TB22 786 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 BTN2A2Q8WVV5 523 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 XAB2Q9HCS7 855 aaKnown RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 RPRD1BQ9NQG5 326 aaKnown RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 TDP1Q9NUW8 608 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 YIPF1Q9Y548 306 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 ASTN1O14525 1302 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 SOWAHDA6NJG2 315 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 SOBPA7XYQ1 873 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 GOLGA8TH3BQL2 631 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 STAU1O95793 577 aaKnown RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 INPP1P49441 399 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 HSPA14Q0VDF9 509 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 C2CD6Q53TS8 623 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 ACAD10Q6JQN1 1059 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 IRGCQ6NXR0 463 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 CRTC3Q6UUV7 619 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 Q7L0L9 218 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 VSTM4Q8IW00 320 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 SIX5Q8N196 739 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 RNF10Q8N5U6 811 aaKnown RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 DEFB119Q8N690 84 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 DDX1Q92499 740 aaKnown RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 KCNB2Q92953 911 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 TBCBQ99426 244 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 KCTD10Q9H3F6 313 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 ELOVL6Q9H5J4 265 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 TASP1Q9H6P5 420 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 ASF1AQ9Y294 204 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 RPS6KL1Q9Y6S9 549 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 SIP14410 1827 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 A0A0B4J269 797 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 TTC26A0AVF1 554 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 FOXN3O00409 490 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 OR10H2O60403 315 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 MICAL2O94851 1124 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 BMP1P13497 986 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 GJA1P17302 382 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 ATP6V1C1P21283 382 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 AGXTP21549 392 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 CASRP41180 1078 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 PRIM2P49643 509 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 SLC6A3Q01959 620 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 SIGLEC14Q08ET2 396 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 IFT88Q13099 833 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 SIM2Q14190 667 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 MINDY4Q4G0A6 757 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 ATP13A4Q4VNC1 1196 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 CCDC137Q6PK04 289 aaKnown RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 NLRP9Q7RTR0 991 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 RASGRP3Q8IV61 690 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 HOMEZQ8IX15 550 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 RFWD2Q8NHY2 731 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 ELMO1Q92556 727 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 MAML1Q92585 1016 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 PLEKHA8Q96JA3 519 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 CYTH2Q99418 400 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 SMYD3Q9H7B4 428 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 CNGB3Q9NQW8 809 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 RIC8BQ9NVN3 520 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 KCTD5Q9NXV2 234 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms