RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 PREBQ9HCU5 417 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 UCKL1Q9NWZ5 548 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 COX16Q9P0S2 106 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 PPM1HQ9ULR3 514 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 ALOX15BO15296 676 aa18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 ATP9BO43861 1147 aa18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 RNGTTO60942 597 aaKnown RBP18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 SMC2O95347 1197 aa18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 IGLV3-25P01717 112 aa18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 PCBP4P57723 403 aaKnown RBP18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 GCNT1Q02742 428 aa18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 CENPCQ03188 943 aa18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 TAF1BQ53T94 588 aaPredicted RBP18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 ZNF248Q8NDW4 579 aa18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 LMO3Q8TAP4 145 aa18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 RPRD1AQ96P16 312 aaPredicted RBP18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 MED15Q96RN5 788 aa18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 PPP1R9BQ96SB3 815 aa18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 SLC4A5Q9BY07 1137 aa18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 VPS28Q9UK41 221 aa18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 ATP6V1DQ9Y5K8 247 aa18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 MYO18BQ8IUG5 2567 aa18.82■□□□□ 0.6
UPK3BP1-201ENST00000428678 PSMA7O14818 248 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 MCF2LO15068 1137 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 MPOP05164 745 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 SLC2A3P11169 496 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 VASPP50552 380 aaPredicted RBP18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 TAS2R38P59533 333 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 KCNMA1Q12791 1236 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 STIM1Q13586 685 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 BROXQ5VW32 411 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 FBXL22Q6P050 247 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 PCSK4Q6UW60 755 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 TMEM145Q8NBT3 493 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 STK32AQ8WU08 396 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 CEP63Q96MT8 703 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 KREMEN1Q96MU8 473 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 FEM1AQ9BSK4 669 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 CALN1Q9BXU9 219 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 THAP9Q9H5L6 903 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 KLHL11Q9NVR0 708 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 DDIT4Q9NX09 232 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 NAV2Q8IVL1 2488 aa18.81■□□□□ 0.6
UPK3BP1-201ENST00000428678 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 A0A1W2PQU0 124 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 ERVH48-1M5A8F1 160 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 P4HA2O15460 535 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 MED7O43513 233 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 OPA1O60313 960 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 LETM1O95202 739 aaPredicted RBP18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 ALPPL2P10696 532 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 CCR1P32246 355 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 GABREP78334 506 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 CDK17Q00537 523 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 ZNF177Q13360 481 aaPredicted RBP18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 TAF5Q15542 800 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 FMR1NBQ8N0W7 255 aaPredicted RBP18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 SH2D3CQ8N5H7 860 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 OR52K2Q8NGK3 314 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 SMARCE1Q969G3 411 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 ALG14Q96F25 216 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 ZNF578Q96N58 590 aaPredicted RBP18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 DEPDC7Q96QD5 511 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 FZD3Q9NPG1 666 aa18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 FARP1Q9Y4F1 1045 aaPredicted RBP18.8■□□□□ 0.6
UPK3BP1-201ENST00000428678 KPNA3O00505 521 aaPredicted RBP18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 THAP12O43422 761 aa18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 USP12O75317 370 aa18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 PIAS2O75928 621 aa18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 CKMT1AP12532 417 aa18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 AKT2P31751 481 aa18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 IRAK1P51617 712 aa18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 TMPRSS3P57727 454 aa18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 EIF4EBP2Q13542 120 aaPredicted RBP18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 PIP5KL1Q5T9C9 394 aa18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 TMEM110Q86TL2 294 aa18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 EHBP1Q8NDI1 1231 aa18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 OR13H1Q8NG92 308 aa18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 GTPBP4Q9BZE4 634 aaKnown RBP18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 CAAP1Q9H8G2 361 aa18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 CPNE5Q9HCH3 593 aa18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 VANGL2Q9ULK5 521 aa18.79■□□□□ 0.6
UPK3BP1-201ENST00000428678 TRPM6Q9BX84 2022 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 CAPN8A6NHC0 703 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 CSO75390 466 aaKnown RBP18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 MYF5P13349 255 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 GGCXP38435 758 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 UCNP55089 124 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 PDCLQ13371 301 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 AUHQ13825 339 aaKnown RBP18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 MEA1Q16626 185 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 ZNF284Q2VY69 593 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 ARHGAP40Q5TG30 622 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 CDCP2Q5VXM1 449 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 ISM2Q6H9L7 571 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 HORMAD1Q86X24 394 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 DEFB106AQ8N104 65 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 LSMEM2Q8N112 164 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 DHTKD1Q96HY7 919 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms