RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 TNMDQ9H2S6 317 aa11.85□□□□□ -0.51
DDX39B-209ENST00000428450 ABCC13Q9NSE7 274 aa11.85□□□□□ -0.51
DDX39B-209ENST00000428450 DMAC2Q9NW81 257 aa11.85□□□□□ -0.51
DDX39B-209ENST00000428450 SRPK3Q9UPE1 567 aa11.85□□□□□ -0.51
DDX39B-209ENST00000428450 CEP83Q9Y592 693 aa11.85□□□□□ -0.51
DDX39B-209ENST00000428450 SPTY2D1-AS1A0A0U1RR47 76 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 TPP1O14773 563 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 IKBKBO14920 756 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 AQP9O43315 295 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 LUC7L3O95232 432 aaKnown RBP11.84□□□□□ -0.51
DDX39B-209ENST00000428450 MOCS3O95396 460 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 AKT2P31751 481 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 NUMBP49757 651 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 SPIDRQ14159 915 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 KNOP1Q1ED39 458 aaKnown RBP11.84□□□□□ -0.51
DDX39B-209ENST00000428450 DCAF6Q58WW2 860 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 MS4A13Q5J8X5 152 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 NUGGCQ68CJ6 796 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 ARHGAP17Q68EM7 881 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 OR6B2Q6IFH4 312 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 MSANTD2Q6P1R3 559 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 CNNM4Q6P4Q7 775 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 DSG4Q86SJ6 1040 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 HORMAD1Q86X24 394 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 DCP2Q8IU60 420 aaKnown RBP11.84□□□□□ -0.51
DDX39B-209ENST00000428450 SLC35F3Q8IY50 421 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 SLC4A11Q8NBS3 891 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 OR8D1Q8WZ84 308 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 CCDC3Q9BQI4 270 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 BACH2Q9BYV9 841 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 NUCKS1Q9H1E3 243 aaKnown RBP11.84□□□□□ -0.51
DDX39B-209ENST00000428450 SEPT10Q9P0V9 454 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 ANAPC2Q9UJX6 822 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 ZFR2Q9UPR6 939 aaKnown RBP11.84□□□□□ -0.51
DDX39B-209ENST00000428450 PLAAQ9Y263 795 aa11.84□□□□□ -0.51
DDX39B-209ENST00000428450 SCN8AQ9UQD0 1980 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 POM121BA6NF01 834 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 A6NNZ2 444 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 MCF2LO15068 1137 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 NNMTP40261 264 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 PIK3CAP42336 1068 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 RAD23BP54727 409 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 ADIGQ0VDE8 80 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 KCNAB2Q13303 367 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 E2F4Q16254 413 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 TPRG1LQ5T0D9 272 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 ZFAND4Q86XD8 727 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 FAM174AQ8TBP5 190 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 TMC2Q8TDI7 906 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 TMEM174Q8WUU8 243 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 NAT6Q93015 286 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 TATDN2Q93075 761 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 SLC12A9Q9BXP2 914 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 LRRC27Q9C0I9 530 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 NIF3L1Q9GZT8 377 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 EPB41L5Q9HCM4 733 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 TUBD1Q9UJT1 453 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 HS3ST3A1Q9Y663 406 aa11.83□□□□□ -0.52
DDX39B-209ENST00000428450 POLQO75417 2590 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 RP1L1Q8IWN7 2480 aaPredicted RBP11.82□□□□□ -0.52
DDX39B-209ENST00000428450 PRAMEF33A0A0G2JMD5 474 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 TYW5A2RUC4 315 aaKnown RBP11.82□□□□□ -0.52
DDX39B-209ENST00000428450 C1QTNF3-AMACRE9PGA6 284 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 H3BM21 787 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 XPO1O14980 1071 aaKnown RBP11.82□□□□□ -0.52
DDX39B-209ENST00000428450 ALOX15BO15296 676 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 SPINT1O43278 529 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 ATP9BO43861 1147 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 PRAMEF10O60809 474 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 GCATO75600 419 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 CTSLP07711 333 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 CD97P48960 835 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 VASPP50552 380 aaPredicted RBP11.82□□□□□ -0.52
DDX39B-209ENST00000428450 POLE2P56282 527 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 TBX4P57082 545 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 FGL2Q14314 439 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 TMEM259Q4ZIN3 620 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 SEL1L3Q68CR1 1132 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 BORAQ6PGQ7 559 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 PTAR1Q7Z6K3 402 aaPredicted RBP11.82□□□□□ -0.52
DDX39B-209ENST00000428450 PARGQ86W56 976 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 SLC9A9Q8IVB4 645 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 CCDC117Q8IWD4 279 aaPredicted RBP11.82□□□□□ -0.52
DDX39B-209ENST00000428450 SCML4Q8N228 414 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 LMX1AQ8TE12 382 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 TAS1R2Q8TE23 839 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 MIB2Q96AX9 1013 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 FCRL2Q96LA5 508 aaPredicted RBP11.82□□□□□ -0.52
DDX39B-209ENST00000428450 IPO9Q96P70 1041 aaKnown RBP11.82□□□□□ -0.52
DDX39B-209ENST00000428450 IL12RB2Q99665 862 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 DDX50Q9BQ39 737 aaKnown RBP11.82□□□□□ -0.52
DDX39B-209ENST00000428450 FOXP3Q9BZS1 431 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 LRRC4Q9HBW1 653 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 SLC39A2Q9NP94 309 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 FOXJ2Q9P0K8 574 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 PISDQ9UG56 409 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 RABGEF1Q9UJ41 708 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 LRRK1Q38SD2 2015 aa11.82□□□□□ -0.52
DDX39B-209ENST00000428450 TMX2-CTNND1H3BSU7 103 aa11.81□□□□□ -0.52
DDX39B-209ENST00000428450 RNF103O00237 685 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms