RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 ABHD10Q9NUJ1 306 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 TMEM74BQ9NUR3 256 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 GPATCH2LQ9NWQ4 482 aa17.1■□□□□ 0.33
VRK2-204ENST00000428021 K7ERQ8 282 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 SMAD6O43541 496 aaKnown RBP17.09■□□□□ 0.33
VRK2-204ENST00000428021 NDUFS2O75306 463 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 LRCH4O75427 683 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 DESP17661 470 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 MIPP30301 263 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 ACVRL1P37023 503 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 MAPKAPK2P49137 400 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 GALCP54803 685 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 LMNB2Q03252 620 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 ZNF33AQ06730 810 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 CA9Q16790 459 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 LYSMD4Q5XG99 296 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 TCEAL6Q6IPX3 200 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 LINGO4Q6UY18 593 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 FAM124AQ86V42 546 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 MMAAQ8IVH4 418 aaKnown RBP17.09■□□□□ 0.33
VRK2-204ENST00000428021 PIGKQ92643 395 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 TCEAL3Q969E4 200 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 CHP1Q99653 195 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 SPON2Q9BUD6 331 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 GPR174Q9BXC1 333 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 TRIM5Q9C035 493 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 PABPC3Q9H361 631 aaKnown RBP17.09■□□□□ 0.33
VRK2-204ENST00000428021 NOL6Q9H6R4 1146 aaKnown RBP17.09■□□□□ 0.33
VRK2-204ENST00000428021 RXFP3Q9NSD7 469 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 PCSK1NQ9UHG2 260 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 DNAI1Q9UI46 699 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 PILRBQ9UKJ0 227 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 PI4KAP42356 2102 aa17.09■□□□□ 0.33
VRK2-204ENST00000428021 SSU72P8A0A1W2PR75 194 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 PATE3B3GLJ2 98 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 CREB3O43889 395 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 GDF9O60383 454 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 RNF8O76064 485 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 DNTTP04053 509 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 EPHB2P29323 1055 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 ACSL1P33121 698 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 ARF5P84085 180 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 ELAVL3Q14576 367 aaKnown RBP17.08■□□□□ 0.32
VRK2-204ENST00000428021 CST6Q15828 149 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 SLC18A3Q16572 532 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 ACCSLQ4AC99 568 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 ERMARDQ5T6L9 678 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 DAB2IPQ5VWQ8 1189 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 PEAR1Q5VY43 1037 aaPredicted RBP17.08■□□□□ 0.32
VRK2-204ENST00000428021 Q6ZVU0 165 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 SYT12Q8IV01 421 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 RTL3Q8N8U3 475 aaKnown RBP17.08■□□□□ 0.32
VRK2-204ENST00000428021 ARHGEF2Q92974 986 aaKnown RBP17.08■□□□□ 0.32
VRK2-204ENST00000428021 RMDN1Q96DB5 314 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 HSPA12BQ96MM6 686 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 EPAS1Q99814 870 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 SNRNP25Q9BV90 132 aaKnown RBP17.08■□□□□ 0.32
VRK2-204ENST00000428021 ATP13A1Q9HD20 1204 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 SERGEFQ9UGK8 458 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 AP4E1Q9UPM8 1137 aa17.08■□□□□ 0.32
VRK2-204ENST00000428021 ATXN2Q99700 1313 aaKnown RBP17.07■□□□□ 0.32
VRK2-204ENST00000428021 WASH4PA8MWX3 477 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 CBX4O00257 560 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 MID1O15344 667 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 RNASEH1O60930 286 aaKnown RBP17.07■□□□□ 0.32
VRK2-204ENST00000428021 ZNF821O75541 412 aaPredicted RBP17.07■□□□□ 0.32
VRK2-204ENST00000428021 CD160O95971 181 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 TPM1P09493 284 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 TCF4P15884 667 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 IL1R2P27930 398 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 SLC8A1P32418 973 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 ACAP1Q15027 740 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 USP30Q70CQ3 517 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 ATP11CQ8NB49 1132 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 CADM4Q8NFZ8 388 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 BTBD6Q96KE9 485 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 KCTD15Q96SI1 283 aaPredicted RBP17.07■□□□□ 0.32
VRK2-204ENST00000428021 NUP85Q9BW27 656 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 PACSIN1Q9BY11 444 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 MAGEH1Q9H213 219 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 DHX35Q9H5Z1 703 aaKnown RBP17.07■□□□□ 0.32
VRK2-204ENST00000428021 ZNHIT6Q9NWK9 470 aaKnown RBP17.07■□□□□ 0.32
VRK2-204ENST00000428021 FBXL12Q9NXK8 326 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 SARDHQ9UL12 918 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 SCML1Q9UN30 329 aa17.07■□□□□ 0.32
VRK2-204ENST00000428021 METTL12A8MUP2 240 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 PRR5-ARHGAP8B1AHC4 643 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 MCF2LO15068 1137 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 PRPSAP2O60256 369 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 FOXD2O60548 495 aaPredicted RBP17.06■□□□□ 0.32
VRK2-204ENST00000428021 RAMP2O60895 175 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 PCK1P35558 622 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 PSMD8P48556 350 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 CLCN6P51797 869 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 METAP1P53582 386 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 ARHGAP8P85298 464 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 SLC20A2Q08357 652 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 RSPO4Q2I0M5 234 aaPredicted RBP17.06■□□□□ 0.32
VRK2-204ENST00000428021 TTC31Q49AM3 519 aaPredicted RBP17.06■□□□□ 0.32
VRK2-204ENST00000428021 IL31Q6EBC2 164 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms