RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ERGIC2Q96RQ1 377 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 EBF2Q9HAK2 575 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 OSGEPQ9NPF4 335 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 TM7SF3Q9NS93 570 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 SEPT11Q9NVA2 429 aaKnown RBP18.88■□□□□ 0.61
PSPC1-202ENST00000427943 VPS51Q9UID3 782 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 SARDHQ9UL12 918 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 WASF3Q9UPY6 502 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 KMT2BQ9UMN6 2715 aaPredicted RBP18.88■□□□□ 0.61
PSPC1-202ENST00000427943 CABIN1Q9Y6J0 2220 aa18.88■□□□□ 0.61
PSPC1-202ENST00000427943 IGLV3-10A0A075B6K4 115 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 A0A0D9SEW6 157 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 A0A1W2PPC4 97 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 DRGXA6NNA5 263 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 HYAL3O43820 417 aaPredicted RBP18.87■□□□□ 0.61
PSPC1-202ENST00000427943 MT-CO1P00395 513 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 UNGP13051 313 aaPredicted RBP18.87■□□□□ 0.61
PSPC1-202ENST00000427943 OR1E1P30953 314 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 NSFP46459 744 aaKnown RBP18.87■□□□□ 0.61
PSPC1-202ENST00000427943 VASPP50552 380 aaPredicted RBP18.87■□□□□ 0.61
PSPC1-202ENST00000427943 KRT83P78385 493 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 AKAP13Q12802 2813 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 PTP4A2Q12974 167 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 ST3GAL2Q16842 350 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 ANO6Q4KMQ2 910 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 KCNT1Q5JUK3 1230 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 LINGO4Q6UY18 593 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.87■□□□□ 0.61
PSPC1-202ENST00000427943 DSG4Q86SJ6 1040 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 SETD3Q86TU7 594 aaPredicted RBP18.87■□□□□ 0.61
PSPC1-202ENST00000427943 OR7D4Q8NG98 312 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 C1orf74Q96LT6 269 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 HAPLN3Q96S86 360 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 C2orf49Q9BVC5 232 aaPredicted RBP18.87■□□□□ 0.61
PSPC1-202ENST00000427943 SCNM1Q9BWG6 230 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 ANKRD6Q9Y2G4 727 aa18.87■□□□□ 0.61
PSPC1-202ENST00000427943 CACNA1BQ00975 2339 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 USP24Q9UPU5 2620 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 K7ERQ8 282 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 KCNK3O14649 394 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 RTN2O75298 545 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 GLDCP23378 1020 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 RRM1P23921 792 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 SDC4P31431 198 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 PPP2CBP62714 309 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 PPP2CAP67775 309 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 CLEC16AQ2KHT3 1053 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 CCDC14Q49A88 953 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 DRC7Q8IY82 874 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 DCAF4L2Q8NA75 395 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 ATP11CQ8NB49 1132 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 PIP4K2CQ8TBX8 421 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 SETD7Q8WTS6 366 aaKnown RBP18.86■□□□□ 0.61
PSPC1-202ENST00000427943 ADAM22Q9P0K1 906 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 HS3ST2Q9Y278 367 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 PCDHB9Q9Y5E1 797 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 PTPRBP23467 1997 aa18.86■□□□□ 0.61
PSPC1-202ENST00000427943 LRRC10BA6NIK2 292 aa18.85■□□□□ 0.61
PSPC1-202ENST00000427943 C2CD4BA6NLJ0 364 aa18.85■□□□□ 0.61
PSPC1-202ENST00000427943 C1QTNF3-AMACRE9PGA6 284 aa18.85■□□□□ 0.61
PSPC1-202ENST00000427943 SMAD6O43541 496 aaKnown RBP18.85■□□□□ 0.61
PSPC1-202ENST00000427943 ENDOD1O94919 500 aa18.85■□□□□ 0.61
PSPC1-202ENST00000427943 ZNF883P0CG24 379 aa18.85■□□□□ 0.61
PSPC1-202ENST00000427943 TRIP6Q15654 476 aaKnown RBP18.85■□□□□ 0.61
PSPC1-202ENST00000427943 C6orf118Q5T5N4 469 aa18.85■□□□□ 0.61
PSPC1-202ENST00000427943 ACBD5Q5T8D3 534 aaPredicted RBP18.85■□□□□ 0.61
PSPC1-202ENST00000427943 SELENOOQ9BVL4 669 aa18.85■□□□□ 0.61
PSPC1-202ENST00000427943 ZYG11BQ9C0D3 744 aa18.85■□□□□ 0.61
PSPC1-202ENST00000427943 AASDHPPTQ9NRN7 309 aa18.85■□□□□ 0.61
PSPC1-202ENST00000427943 TMEM51Q9NW97 253 aa18.85■□□□□ 0.61
PSPC1-202ENST00000427943 ZNF212Q9UDV6 495 aa18.85■□□□□ 0.61
PSPC1-202ENST00000427943 PCOLCE2Q9UKZ9 415 aa18.85■□□□□ 0.61
PSPC1-202ENST00000427943 TBC1D3DA0A087WVF3 549 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 TBC1D3IA0A087WXS9 549 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 TBC1D3EA0A087X179 549 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 TBC1D3KA0A087X1G2 549 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 TBC1D3FA6NER0 549 aaPredicted RBP18.84■□□□□ 0.61
PSPC1-202ENST00000427943 C1QTNF9BB2RNN3 333 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 TBC1D3LB9A6J9 549 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 H0Y8X5 98 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 MCF2LO15068 1137 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 ALOX15BO15296 676 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 TEX33O43247 280 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 TBC1D3HP0C7X1 549 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 C1QTNF9P0C862 333 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 KRT3P12035 628 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 CCR5P51681 352 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 RACK1P63244 317 aaKnown RBP18.84■□□□□ 0.61
PSPC1-202ENST00000427943 IL9RQ01113 521 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 CNTN1Q12860 1018 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 HNRNPDQ14103 355 aaKnown RBP18.84■□□□□ 0.61
PSPC1-202ENST00000427943 FAM46CQ5VWP2 391 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 TBC1D3GQ6DHY5 549 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 TBC1D3CQ6IPX1 549 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 CAVIN1Q6NZI2 390 aaKnown RBP18.84■□□□□ 0.61
PSPC1-202ENST00000427943 C22orf39Q6P5X5 142 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 PHF13Q86YI8 300 aaPredicted RBP18.84■□□□□ 0.61
PSPC1-202ENST00000427943 TBC1D3Q8IZP1 549 aaPredicted RBP18.84■□□□□ 0.61
PSPC1-202ENST00000427943 FAM172AQ8WUF8 416 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 FAM131CQ96AQ9 280 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms