RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 CLP1Q92989 425 aaKnown RBP27.14■■□□□ 1.94
SH3GL3-202ENST00000427482 PSMG2Q969U7 264 aa27.14■■□□□ 1.94
SH3GL3-202ENST00000427482 UXTQ9UBK9 157 aaPredicted RBP27.14■■□□□ 1.94
SH3GL3-202ENST00000427482 ZNF180Q9UJW8 692 aa27.14■■□□□ 1.94
SH3GL3-202ENST00000427482 AAR2Q9Y312 384 aaKnown RBP27.14■■□□□ 1.94
SH3GL3-202ENST00000427482 FAM47DPA6NHR8 397 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 NDUFAB1O14561 156 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 FAM107AO95990 144 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 PEX11BO96011 259 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 HLA-DQB2P05538 268 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 HSPA1AP0DMV8 641 aaKnown RBP27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 HSPA1BP0DMV9 641 aaKnown RBP27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 SLC18A1P54219 525 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 FAM133BQ5BKY9 247 aaKnown RBP27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 LGI2Q8N0V4 545 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 CCT8L2Q96SF2 557 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 SSU72Q9NP77 194 aaKnown RBP27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 RBM22Q9NW64 420 aaKnown RBP eCLIP27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 NKIRAS1Q9NYS0 192 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 PRKAG2Q9UGJ0 569 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 SMG5Q9UPR3 1016 aaKnown RBP27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 SSX2IPQ9Y2D8 614 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 SLC6A4P31645 630 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 SLC11A2P49281 568 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 NAPEPLDQ6IQ20 393 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 C4orf33Q8N1A6 199 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 AZIN2Q96A70 460 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 PPP1R2P1Q96PQ5 205 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 UBP1Q9NZI7 540 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 BFARQ9NZS9 450 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 INSL6Q9Y581 213 aa27.13■■□□□ 1.93
SH3GL3-202ENST00000427482 SPAG7O75391 227 aa27.12■■□□□ 1.93
SH3GL3-202ENST00000427482 ANXA9O76027 345 aa27.12■■□□□ 1.93
SH3GL3-202ENST00000427482 CRYMQ14894 314 aa27.12■■□□□ 1.93
SH3GL3-202ENST00000427482 LRRC14Q15048 493 aa27.12■■□□□ 1.93
SH3GL3-202ENST00000427482 DNAAF3Q8N9W5 541 aa27.12■■□□□ 1.93
SH3GL3-202ENST00000427482 ZBED2Q9BTP6 218 aa27.12■■□□□ 1.93
SH3GL3-202ENST00000427482 RNF38Q9H0F5 515 aa27.12■■□□□ 1.93
SH3GL3-202ENST00000427482 CXXC1Q9P0U4 656 aaPredicted RBP27.12■■□□□ 1.93
SH3GL3-202ENST00000427482 SAMD15Q9P1V8 674 aa27.12■■□□□ 1.93
SH3GL3-202ENST00000427482 MIA3Q5JRA6 1907 aa27.12■■□□□ 1.93
SH3GL3-202ENST00000427482 C2orf78A6NCI8 922 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 RAMP2O60895 175 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 STC2O76061 302 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 CNPP09543 421 aaKnown RBP27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 HNRNPDQ14103 355 aaKnown RBP27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 PARP15Q460N3 678 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 TMEM150AQ86TG1 271 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 LINC00523Q86TU6 105 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 SPATA22Q8NHS9 363 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 ZNF473Q8WTR7 871 aaKnown RBP27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 TTC17Q96AE7 1141 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 ZNF317Q96PQ6 595 aaPredicted RBP27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 KLF16Q9BXK1 252 aaPredicted RBP27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 J3KR12 359 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 AP3B1O00203 1094 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 TYROBPO43914 113 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 KRT4P19013 534 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 EN2P19622 333 aaPredicted RBP27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 NPY2RP49146 381 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 YBEYP58557 167 aaPredicted RBP27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 POLD3Q15054 466 aaPredicted RBP27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 TMEM240Q5SV17 173 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 TTC39BQ5VTQ0 682 aaPredicted RBP27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 RFWD3Q6PCD5 774 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 FOXR1Q6PIV2 292 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 ITIH5Q86UX2 942 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 DENND1CQ8IV53 801 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 KLHL23Q8NBE8 558 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 DYDC1Q8WWB3 177 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 CHMP6Q96FZ7 201 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 SGSM3Q96HU1 749 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 RETREG1Q9H6L5 497 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 SP110Q9HB58 689 aa27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 ZNF334Q9HCZ1 680 aaPredicted RBP27.11■■□□□ 1.93
SH3GL3-202ENST00000427482 FAM155BO75949 473 aa27.1■■□□□ 1.93
SH3GL3-202ENST00000427482 KLKB1P03952 638 aa27.1■■□□□ 1.93
SH3GL3-202ENST00000427482 OR1E1P30953 314 aa27.1■■□□□ 1.93
SH3GL3-202ENST00000427482 CA8P35219 290 aa27.1■■□□□ 1.93
SH3GL3-202ENST00000427482 RENBPP51606 427 aa27.1■■□□□ 1.93
SH3GL3-202ENST00000427482 GEMP55040 296 aa27.1■■□□□ 1.93
SH3GL3-202ENST00000427482 SPANXN3Q5MJ09 141 aa27.1■■□□□ 1.93
SH3GL3-202ENST00000427482 APOL2Q9BQE5 337 aa27.1■■□□□ 1.93
SH3GL3-202ENST00000427482 MLXIPLQ9NP71 852 aa27.1■■□□□ 1.93
SH3GL3-202ENST00000427482 GKN1Q9NS71 199 aa27.1■■□□□ 1.93
SH3GL3-202ENST00000427482 MYLKQ15746 1914 aa27.1■■□□□ 1.93
SH3GL3-202ENST00000427482 TGM5O43548 720 aa27.09■■□□□ 1.93
SH3GL3-202ENST00000427482 UGT1A9O60656 530 aa27.09■■□□□ 1.93
SH3GL3-202ENST00000427482 NEBLO76041 1014 aa27.09■■□□□ 1.93
SH3GL3-202ENST00000427482 MT-CYBP00156 380 aaPredicted RBP27.09■■□□□ 1.93
SH3GL3-202ENST00000427482 POLBP06746 335 aa27.09■■□□□ 1.93
SH3GL3-202ENST00000427482 CORO1AP31146 461 aaKnown RBP27.09■■□□□ 1.93
SH3GL3-202ENST00000427482 CDH17Q12864 832 aa27.09■■□□□ 1.93
SH3GL3-202ENST00000427482 SERINC3Q13530 473 aa27.09■■□□□ 1.93
SH3GL3-202ENST00000427482 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP27.09■■□□□ 1.93
SH3GL3-202ENST00000427482 DENND1AQ8TEH3 1009 aa27.09■■□□□ 1.93
SH3GL3-202ENST00000427482 UGT1A7Q9HAW7 530 aa27.09■■□□□ 1.93
SH3GL3-202ENST00000427482 UGT1A10Q9HAW8 530 aa27.09■■□□□ 1.93
SH3GL3-202ENST00000427482 UGT1A8Q9HAW9 530 aa27.09■■□□□ 1.93
SH3GL3-202ENST00000427482 F11P03951 625 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms