RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 HIBCHQ6NVY1 386 aaPredicted RBP5.48□□□□□ -1.53
LINC00458-202ENST00000427299 FAM173BQ6P4H8 233 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 CCDC129Q6ZRS4 1044 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 STOX1Q6ZVD7 989 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 MB21D2Q8IYB1 491 aaPredicted RBP5.48□□□□□ -1.53
LINC00458-202ENST00000427299 CPXCR1Q8N123 301 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 TRIML1Q8N9V2 468 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 TERB1Q8NA31 727 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 ATP11CQ8NB49 1132 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 LINC00301Q8NCQ3 95 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 ENGASEQ8NFI3 743 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 ABHD11Q8NFV4 315 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 SPATA3Q8NHX4 192 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 VCPIP1Q96JH7 1222 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 NEUROD6Q96NK8 337 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 GDF15Q99988 308 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 SENP7Q9BQF6 1050 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 PYM1Q9BRP8 204 aaKnown RBP5.48□□□□□ -1.53
LINC00458-202ENST00000427299 TEX13AQ9BXU3 409 aaPredicted RBP5.48□□□□□ -1.53
LINC00458-202ENST00000427299 WDR12Q9GZL7 423 aaKnown RBP5.48□□□□□ -1.53
LINC00458-202ENST00000427299 GOLPH3LQ9H4A5 285 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 PNPLA8Q9NP80 782 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 MYO1AQ9UBC5 1043 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 ORC3Q9UBD5 711 aaPredicted RBP5.48□□□□□ -1.53
LINC00458-202ENST00000427299 ANAPC4Q9UJX5 808 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 COL24A1Q17RW2 1714 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 KAT6BQ8WYB5 2073 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 LY6G6EA0A0G2JKS1 128 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 CCDC196A0A1B0GTZ2 297 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 MBD3L4A6NDZ8 208 aaPredicted RBP5.47□□□□□ -1.53
LINC00458-202ENST00000427299 MBD3L3A6NE82 208 aaPredicted RBP5.47□□□□□ -1.53
LINC00458-202ENST00000427299 ATP8B1O43520 1251 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 PDE8BO95263 885 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 PARP1P09874 1014 aaKnown RBP5.47□□□□□ -1.53
LINC00458-202ENST00000427299 UQCRFS1P1P0C7P4 283 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 IL1R1P14778 569 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 CMA1P23946 247 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 U2AF2P26368 475 aaKnown RBP eCLIP5.47□□□□□ -1.53
LINC00458-202ENST00000427299 IL1R2P27930 398 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 IL6STP40189 918 aaPredicted RBP5.47□□□□□ -1.53
LINC00458-202ENST00000427299 SYKP43405 635 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 PIP4K2AP48426 406 aaPredicted RBP5.47□□□□□ -1.53
LINC00458-202ENST00000427299 UCP3P55916 312 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 TUBB4BP68371 445 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 CEBPZQ03701 1054 aaKnown RBP5.47□□□□□ -1.53
LINC00458-202ENST00000427299 SLC39A6Q13433 755 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 TBC1D25Q3MII6 688 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 TEX35Q5T0J7 233 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 JAKMIP3Q5VZ66 844 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 LMBRD2Q68DH5 695 aaPredicted RBP5.47□□□□□ -1.53
LINC00458-202ENST00000427299 SHC4Q6S5L8 630 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 MTHFD1LQ6UB35 978 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 ATG9AQ7Z3C6 839 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 DNAJC5GQ8N7S2 189 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 MNS1Q8NEH6 495 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 OR56A3Q8NH54 315 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 C16orf52Q8NHV5 167 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 XAGE5Q8WWM1 108 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 SOCS4Q8WXH5 440 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 KIAA1191Q96A73 305 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 EDC3Q96F86 508 aaKnown RBP5.47□□□□□ -1.53
LINC00458-202ENST00000427299 PPP1R13BQ96KQ4 1090 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 LENG8Q96PV6 779 aaPredicted RBP5.47□□□□□ -1.53
LINC00458-202ENST00000427299 FAM118BQ9BPY3 351 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 A1CFQ9NQ94 594 aaKnown RBP5.47□□□□□ -1.53
LINC00458-202ENST00000427299 PCDHA7Q9UN72 937 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 LZTS1Q9Y250 596 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 MORC2Q9Y6X9 1032 aaPredicted RBP5.47□□□□□ -1.53
LINC00458-202ENST00000427299 MROH7-TTC4A0A0A0MT08 1334 aa5.47□□□□□ -1.53
LINC00458-202ENST00000427299 NRAPQ86VF7 1730 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 IGKV2D-30A0A075B6S6 120 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 CCDC187A0A096LP49 1063 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 FAM237AA0A1B0GTK4 181 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 ERICH2A1L162 156 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 TMEM233B4DJY2 109 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 PYCARD-AS1I3L0S3 204 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 GPAA1O43292 621 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 EXOC3O60645 756 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 CTDNEP1O95476 244 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 SERPINC1P01008 464 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 MT-ND5P03915 603 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 PCCAP05165 728 aaPredicted RBP5.46□□□□□ -1.54
LINC00458-202ENST00000427299 GRPP07492 148 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 TOP1P11387 765 aaKnown RBP5.46□□□□□ -1.54
LINC00458-202ENST00000427299 PFKFB1P16118 471 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 XBP1P17861 261 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 VIPR2P41587 438 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 NT5C2P49902 561 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 RENBPP51606 427 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 WNT3P56703 355 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 CBX1P83916 185 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 GPS2Q13227 327 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 RAB32Q13637 225 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 TUBB2AQ13885 445 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 PPP2R5BQ15173 497 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 MIDNQ504T8 468 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 MEX3CQ5U5Q3 659 aaKnown RBP5.46□□□□□ -1.54
LINC00458-202ENST00000427299 ZNF813Q6ZN06 617 aa5.46□□□□□ -1.54
LINC00458-202ENST00000427299 ZNF771Q7L3S4 317 aaPredicted RBP5.46□□□□□ -1.54
LINC00458-202ENST00000427299 PAF1Q8N7H5 531 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms