RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 SUDS3Q9H7L9 328 aaPredicted RBP13.64□□□□□ -0.23
USP42-203ENST00000426246 ARHGEF4Q9NR80 690 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 THSD7BQ9C0I4 1608 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 POMCP01189 267 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 MCF2P10911 925 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 DNAL1Q4LDG9 190 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 OLFML1Q6UWY5 402 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 BHMTQ93088 406 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 PRPF18Q99633 342 aaKnown RBP13.64□□□□□ -0.23
USP42-203ENST00000426246 FSD1LQ9BXM9 530 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 PLEKHA5Q9HAU0 1116 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 TCF7L2Q9NQB0 619 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 HMX2A2RU54 273 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 MAGEA13PA6NCF6 341 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 RRN3P2A6NIE6 340 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 RNASEH1O60930 286 aaKnown RBP13.64□□□□□ -0.23
USP42-203ENST00000426246 C2P06681 752 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 CHRNA4P43681 627 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 OCRLQ01968 901 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 MPP3Q13368 585 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 PDK1Q15118 436 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 FSTL4Q6MZW2 842 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 LCLAT1Q6UWP7 414 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 AMIGO2Q86SJ2 522 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 ST13P4Q8IZP2 240 aaPredicted RBP13.64□□□□□ -0.23
USP42-203ENST00000426246 MAPK15Q8TD08 544 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 MZB1Q8WU39 189 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 SNRNP27Q8WVK2 155 aaKnown RBP13.64□□□□□ -0.23
USP42-203ENST00000426246 CERS2Q96G23 380 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 SLC39A3Q9BRY0 314 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 STX18Q9P2W9 335 aaKnown RBP13.64□□□□□ -0.23
USP42-203ENST00000426246 LRRC42Q9Y546 428 aa13.64□□□□□ -0.23
USP42-203ENST00000426246 SMIM35A0A1B0GVV1 85 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 GLRA3O75311 464 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 MT-ND1P03886 318 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 TKTP29401 623 aaKnown RBP13.63□□□□□ -0.23
USP42-203ENST00000426246 IDH3AP50213 366 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 CPT1AP50416 773 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 NKX3-2P78367 333 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 MPP1Q00013 466 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 SATL1Q86VE3 508 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 TMEM40Q8WWA1 233 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 HDAC11Q96DB2 347 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 FCRL3Q96P31 734 aaPredicted RBP13.63□□□□□ -0.23
USP42-203ENST00000426246 GPBP1L1Q9HC44 474 aaPredicted RBP13.63□□□□□ -0.23
USP42-203ENST00000426246 PCDHA11Q9Y5I1 949 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 A0A0A0MRY4 1105 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 NCF1BA6NI72 391 aaPredicted RBP13.63□□□□□ -0.23
USP42-203ENST00000426246 NCF1CA8MVU1 366 aaPredicted RBP13.63□□□□□ -0.23
USP42-203ENST00000426246 MSI1O43347 362 aaKnown RBP13.63□□□□□ -0.23
USP42-203ENST00000426246 PLIN3O60664 434 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 TM7SF2O76062 418 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 NCF1P14598 390 aaPredicted RBP13.63□□□□□ -0.23
USP42-203ENST00000426246 PSEN2P49810 448 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 CDH13P55290 713 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 HSF5Q4G112 596 aaPredicted RBP13.63□□□□□ -0.23
USP42-203ENST00000426246 NUP93Q8N1F7 819 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 SPATA13Q96N96 652 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 GCOM2Q9BZD3 368 aaPredicted RBP13.63□□□□□ -0.23
USP42-203ENST00000426246 RHBDL2Q9NX52 303 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 MKI67P46013 3256 aaKnown RBP13.63□□□□□ -0.23
USP42-203ENST00000426246 C9IYK1 514 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 TREHO43280 583 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 SPAG6O75602 509 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 PFKMP08237 780 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 NMBRP28336 390 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 GJA9P57773 515 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 ABCE1P61221 599 aaKnown RBP13.63□□□□□ -0.23
USP42-203ENST00000426246 TRIM32Q13049 653 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 GK3PQ14409 553 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 KIF19Q2TAC6 998 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 TEDDM1Q5T9Z0 273 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 LCA5Q86VQ0 697 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 KCNMB4Q86W47 210 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 ZNF276Q8N554 614 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 ERLEC1Q96DZ1 483 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 DTNAQ9Y4J8 743 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 SNX13Q9Y5W8 968 aa13.63□□□□□ -0.23
USP42-203ENST00000426246 KNL1Q8NG31 2342 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 YJEFN3A6XGL0 299 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 E7ENQ6 273 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 SMAPO00193 183 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 PPP1R12AO14974 1030 aaPredicted RBP13.62□□□□□ -0.23
USP42-203ENST00000426246 AOC2O75106 756 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 SERPINE1P05121 402 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 FSCN1Q16658 493 aaKnown RBP13.62□□□□□ -0.23
USP42-203ENST00000426246 C6orf52Q5T4I8 152 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 NCBP2-AS2Q69YL0 99 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 SCIMPQ6UWF3 145 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 NAPRTQ6XQN6 538 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 RELL1Q8IUW5 271 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 NIPA2Q8N8Q9 360 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 RPL10LQ96L21 214 aaKnown RBP13.62□□□□□ -0.23
USP42-203ENST00000426246 GAD1Q99259 594 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 PCDHAC1Q9H158 963 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 CAAP1Q9H8G2 361 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 NMRAL1Q9HBL8 299 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 PIGVQ9NUD9 493 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 MPP6Q9NZW5 540 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 ADAMTS6Q9UKP5 1117 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms