RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 ATPIF1Q9UII2 106 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 DUSP10Q9Y6W6 482 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 REREQ9P2R6 1566 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 TGM2P21980 687 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 BTG3Q14201 252 aaPredicted RBP11.3□□□□□ -0.6
TNC-203ENST00000423613 ZFP1Q6P2D0 407 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 PHC2Q8IXK0 858 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 ING5Q8WYH8 240 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 DNAJC1Q96KC8 554 aaKnown RBP11.3□□□□□ -0.6
TNC-203ENST00000423613 CDRT15Q96T59 188 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 NLNQ9BYT8 704 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 RHOBTB2Q9BYZ6 727 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 MIR1-1HGQ9H1L0 117 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 LNPEPQ9UIQ6 1025 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 CROTQ9UKG9 612 aa11.3□□□□□ -0.6
TNC-203ENST00000423613 TARBP1Q13395 1621 aaKnown RBP11.29□□□□□ -0.6
TNC-203ENST00000423613 A0A0B4J269 797 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 FCHO1O14526 889 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 H2AFXP16104 143 aaPredicted RBP11.29□□□□□ -0.6
TNC-203ENST00000423613 SKIV2L2P42285 1042 aaKnown RBP11.29□□□□□ -0.6
TNC-203ENST00000423613 TUBB3Q13509 450 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 C4orf46Q504U0 113 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 ANKRD26P1Q6NSI1 321 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 PAGE2Q7Z2X7 111 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 LINC00523Q86TU6 105 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 ITIH5Q86UX2 942 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 OXCT2Q9BYC2 517 aaPredicted RBP11.29□□□□□ -0.6
TNC-203ENST00000423613 M0QYT0 321 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 RGL2O15211 777 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 MED24O75448 989 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 FGFR2P21802 821 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 HSD3B2P26439 372 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 OXCT1P55809 520 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 RAB25P57735 213 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 BOLA3Q53S33 107 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 AGAP9Q5VTM2 703 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 ADARB2Q9NS39 739 aaKnown RBP11.29□□□□□ -0.6
TNC-203ENST00000423613 PLAGL2Q9UPG8 496 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 AP3D1O14617 1153 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 IFNA14P01570 189 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 GDI2P50395 445 aaKnown RBP11.29□□□□□ -0.6
TNC-203ENST00000423613 FOLH1Q04609 750 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 TIMM50Q3ZCQ8 353 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 CIR1Q86X95 450 aaPredicted RBP11.29□□□□□ -0.6
TNC-203ENST00000423613 ZNF540Q8NDQ6 660 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 MYLPFQ96A32 169 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 FRMD8Q9BZ67 464 aaPredicted RBP11.29□□□□□ -0.6
TNC-203ENST00000423613 IFRD1O00458 451 aaPredicted RBP11.29□□□□□ -0.6
TNC-203ENST00000423613 UBDO15205 165 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 RPS12P25398 132 aaKnown RBP11.29□□□□□ -0.6
TNC-203ENST00000423613 ADSSP30520 456 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 MAGEA12P43365 314 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 RPL5P46777 297 aaKnown RBP11.29□□□□□ -0.6
TNC-203ENST00000423613 EFEMP1Q12805 493 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 TTLL9Q3SXZ7 439 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 RAB43Q86YS6 212 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 PMM1Q92871 262 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 CPB2Q96IY4 423 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 CRISPLD1Q9H336 500 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 GPRC5CQ9NQ84 441 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 HPF1Q9NWY4 346 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 COQ6Q9Y2Z9 468 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 PCDHGA10Q9Y5H3 936 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 CAPN6Q9Y6Q1 641 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 ANXA9O76027 345 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 FNDC3BQ53EP0 1204 aaKnown RBP11.29□□□□□ -0.6
TNC-203ENST00000423613 CBWD2Q8IUF1 395 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 ZNF655Q8N720 491 aaPredicted RBP11.29□□□□□ -0.6
TNC-203ENST00000423613 PIGKQ92643 395 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 MND1Q9BWT6 205 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 RNPEPL1Q9HAU8 725 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 NKIRAS2Q9NYR9 191 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 CLEC4AQ9UMR7 237 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 MAPRE3Q9UPY8 281 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 RPS6KL1Q9Y6S9 549 aa11.29□□□□□ -0.6
TNC-203ENST00000423613 GPR75-ASB3A0A0A6YYF3 556 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 SH3D21A4FU49 640 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 TP73O15350 636 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 VTNP04004 478 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 STIP1P31948 543 aaKnown RBP11.28□□□□□ -0.6
TNC-203ENST00000423613 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.28□□□□□ -0.6
TNC-203ENST00000423613 C12orf50Q8NA57 414 aaPredicted RBP11.28□□□□□ -0.6
TNC-203ENST00000423613 TDRD1Q9BXT4 1180 aaKnown RBP11.28□□□□□ -0.6
TNC-203ENST00000423613 NEUROD4Q9HD90 331 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 SIK3Q9Y2K2 1263 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 OR14I1A6ND48 311 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 ALDH2P05091 517 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 PNPLA4P41247 253 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 S100A12P80511 92 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 DOK6Q6PKX4 331 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 DSG4Q86SJ6 1040 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 ZNF276Q8N554 614 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 KBTBD8Q8NFY9 601 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 GRPEL2Q8TAA5 225 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 S100A13Q99584 98 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 ATXN3LQ9H3M9 355 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 INTS10Q9NVR2 710 aaKnown RBP11.28□□□□□ -0.6
TNC-203ENST00000423613 DDIT4Q9NX09 232 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 GIN1Q9NXP7 522 aa11.28□□□□□ -0.6
TNC-203ENST00000423613 STX11O75558 287 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms