RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ZDBF2Q9HCK1 2354 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 ARHGAP42A6NI28 874 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 STK25O00506 426 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 SNAP91O60641 907 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 CST8O60676 142 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 RNF40O75150 1001 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 ZMPSTE24O75844 475 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 ATP5BP06576 529 aaKnown RBP17.38■□□□□ 0.37
COL7A1-202ENST00000422991 DLDP09622 509 aaKnown RBP17.38■□□□□ 0.37
COL7A1-202ENST00000422991 GLDCP23378 1020 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 CTSOP43234 321 aaPredicted RBP17.38■□□□□ 0.37
COL7A1-202ENST00000422991 DYNLT1P63172 113 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 ECT2LQ008S8 904 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 SULT2A1Q06520 285 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 PTPRNQ16849 979 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 SEL1L2Q5TEA6 688 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 EMC10Q5UCC4 262 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 EGFLAMQ63HQ2 1017 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 IL31Q6EBC2 164 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 BBS12Q6ZW61 710 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 CCDC26Q8TAB7 109 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 KCNV2Q8TDN2 545 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 USP33Q8TEY7 942 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 CYB5D2Q8WUJ1 264 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 UCMAQ8WVF2 138 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 ACDQ96AP0 544 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 CLDN23Q96B33 292 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 HEMGNQ9BXL5 484 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 LMAN1LQ9HAT1 526 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 DTLQ9NZJ0 730 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 SIT1Q9Y3P8 196 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 MYO18AQ92614 2054 aaKnown RBP17.38■□□□□ 0.37
COL7A1-202ENST00000422991 ATG2BQ96BY7 2078 aa17.38■□□□□ 0.37
COL7A1-202ENST00000422991 SHROOM3Q8TF72 1996 aa17.37■□□□□ 0.37
COL7A1-202ENST00000422991 CBX4O00257 560 aa17.37■□□□□ 0.37
COL7A1-202ENST00000422991 DFFAO00273 331 aa17.37■□□□□ 0.37
COL7A1-202ENST00000422991 NCAM2O15394 837 aa17.37■□□□□ 0.37
COL7A1-202ENST00000422991 KDELR3O43731 214 aa17.37■□□□□ 0.37
COL7A1-202ENST00000422991 HNRNPLP14866 589 aaKnown RBP eCLIP17.37■□□□□ 0.37
COL7A1-202ENST00000422991 TGM2P21980 687 aa17.37■□□□□ 0.37
COL7A1-202ENST00000422991 RPS9P46781 194 aaKnown RBP17.37■□□□□ 0.37
COL7A1-202ENST00000422991 PAPOLAP51003 745 aaKnown RBP17.37■□□□□ 0.37
COL7A1-202ENST00000422991 MRPS21P82921 87 aaKnown RBP17.37■□□□□ 0.37
COL7A1-202ENST00000422991 GALNT2Q10471 571 aa17.37■□□□□ 0.37
COL7A1-202ENST00000422991 SLC10A2Q12908 348 aaPredicted RBP17.37■□□□□ 0.37
COL7A1-202ENST00000422991 Q6ZS52 159 aa17.37■□□□□ 0.37
COL7A1-202ENST00000422991 NYAP1Q6ZVC0 841 aa17.37■□□□□ 0.37
COL7A1-202ENST00000422991 ZNF513Q8N8E2 541 aaPredicted RBP17.37■□□□□ 0.37
COL7A1-202ENST00000422991 MRGPRX3Q96LB0 322 aa17.37■□□□□ 0.37
COL7A1-202ENST00000422991 THAP10Q9P2Z0 257 aaPredicted RBP17.37■□□□□ 0.37
COL7A1-202ENST00000422991 ERVW-1Q9UQF0 538 aa17.37■□□□□ 0.37
COL7A1-202ENST00000422991 RAD54BQ9Y620 910 aa17.37■□□□□ 0.37
COL7A1-202ENST00000422991 CKAP5Q14008 2032 aa17.37■□□□□ 0.37
COL7A1-202ENST00000422991 MUC6Q6W4X9 2439 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 CXorf51AA0A1B0GTR3 108 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 NPC1O15118 1278 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 FANCGO15287 622 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 PRAMEF11O60813 436 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 MAP3K6O95382 1288 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 SRPRAP08240 638 aaKnown RBP17.36■□□□□ 0.37
COL7A1-202ENST00000422991 PECAM1P16284 738 aaPredicted RBP17.36■□□□□ 0.37
COL7A1-202ENST00000422991 AOC1P19801 751 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 TIE1P35590 1138 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 PLA2G5P39877 138 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 STK19P49842 368 aaPredicted RBP17.36■□□□□ 0.37
COL7A1-202ENST00000422991 VASPP50552 380 aaPredicted RBP17.36■□□□□ 0.37
COL7A1-202ENST00000422991 ARF5P84085 180 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 ZNF234Q14588 700 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 E2F5Q15329 346 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 C2orf27AQ580R0 203 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 NPNTQ6UXI9 565 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 ARHGAP36Q6ZRI8 547 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 ZNF354CQ86Y25 554 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 ATPAF2Q8N5M1 289 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 ALLCQ8N6M5 410 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 IL17RCQ8NAC3 791 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 RPLP0P6Q8NHW5 317 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 FAM122AQ96E09 287 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 MYO19Q96H55 970 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 OLFM3Q96PB7 478 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 ACOX2Q99424 681 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 PRRX2Q99811 253 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 CHRDQ9H2X0 955 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 PDFQ9HBH1 243 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 ZDHHC4Q9NPG8 344 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 SLC25A13Q9UJS0 675 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 HPCAL4Q9UM19 191 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 HS3ST2Q9Y278 367 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 HEY1Q9Y5J3 304 aa17.36■□□□□ 0.37
COL7A1-202ENST00000422991 KMT2EQ8IZD2 1858 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 ZSCAN5CA6NGD5 496 aaPredicted RBP17.35■□□□□ 0.37
COL7A1-202ENST00000422991 APOC4-APOC2K7ER74 178 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 TJP3O95049 919 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 KLF8O95600 359 aaPredicted RBP17.35■□□□□ 0.37
COL7A1-202ENST00000422991 APOC2P02655 101 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 DCNP07585 359 aaKnown RBP17.35■□□□□ 0.37
COL7A1-202ENST00000422991 AVPR2P30518 371 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 CXCR5P32302 372 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 GARSP41250 739 aaKnown RBP17.35■□□□□ 0.37
COL7A1-202ENST00000422991 CLCN5P51795 746 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms