RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 CNR2P34972 360 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 SLC1A1P43005 524 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 HCAR3P49019 387 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 VAV2P52735 878 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 POLNQ7Z5Q5 900 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 RASSF3Q86WH2 238 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 CACUL1Q86Y37 369 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 MAP7D3Q8IWC1 876 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 OR2T3Q8NH03 318 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 PRCCQ92733 491 aaPredicted RBP16.12■□□□□ 0.17
BRAT1-202ENST00000421712 NELL1Q92832 810 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 SIPA1Q96FS4 1042 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 MYO19Q96H55 970 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 CELF6Q96J87 481 aaKnown RBP16.12■□□□□ 0.17
BRAT1-202ENST00000421712 PCDH18Q9HCL0 1135 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 PRSS16Q9NQE7 514 aa16.12■□□□□ 0.17
BRAT1-202ENST00000421712 RASA4BC9J798 803 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 RASA4O43374 803 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 HRO43593 1189 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 BUB1BO60566 1050 aaPredicted RBP16.11■□□□□ 0.17
BRAT1-202ENST00000421712 RNASEH1O60930 286 aaKnown RBP16.11■□□□□ 0.17
BRAT1-202ENST00000421712 SIN3BO75182 1162 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 MT-CO1P00395 513 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 YBEYP58557 167 aaPredicted RBP16.11■□□□□ 0.17
BRAT1-202ENST00000421712 KIF5AQ12840 1032 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 CAMK2GQ13555 558 aaPredicted RBP16.11■□□□□ 0.17
BRAT1-202ENST00000421712 BYSLQ13895 437 aaKnown RBP16.11■□□□□ 0.17
BRAT1-202ENST00000421712 SIM2Q14190 667 aaPredicted RBP16.11■□□□□ 0.17
BRAT1-202ENST00000421712 DLG2Q15700 870 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 HNRNPA1L2Q32P51 320 aaKnown RBP16.11■□□□□ 0.17
BRAT1-202ENST00000421712 LEKR1Q6ZMV7 388 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 DAAM2Q86T65 1068 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 LRRC8AQ8IWT6 810 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 SH2D3CQ8N5H7 860 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 RLN3Q8WXF3 142 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 SPACA7Q96KW9 195 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 MRGPRX1Q96LB2 322 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 CSPG4P5Q96PW8 444 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 ACE2Q9BYF1 805 aaPredicted RBP16.11■□□□□ 0.17
BRAT1-202ENST00000421712 LACRTQ9GZZ8 138 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 MKRN2Q9H000 416 aaKnown RBP16.11■□□□□ 0.17
BRAT1-202ENST00000421712 RAB23Q9ULC3 237 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 DUSP10Q9Y6W6 482 aa16.11■□□□□ 0.17
BRAT1-202ENST00000421712 TARSL2A2RTX5 802 aaKnown RBP16.1■□□□□ 0.17
BRAT1-202ENST00000421712 ARHGAP42A6NI28 874 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 K7ERQ8 282 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 DFFAO00273 331 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 ARHGAP6O43182 974 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 MAP3K13O43283 966 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 KDELR3O43731 214 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 ATP9BO43861 1147 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 LILRB5O75023 590 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 PTMAP06454 111 aaKnown RBP16.1■□□□□ 0.17
BRAT1-202ENST00000421712 CD48P09326 243 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 SRCP12931 536 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 NBL1P41271 181 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 DNA2P51530 1060 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 NDST2P52849 883 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 HADHBP55084 474 aaKnown RBP16.1■□□□□ 0.17
BRAT1-202ENST00000421712 SLC20A2Q08357 652 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 MMRN1Q13201 1228 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 DPYSQ14117 519 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 PDK2Q15119 407 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 PARP15Q460N3 678 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 C9orf64Q5T6V5 341 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 TMCO3Q6UWJ1 677 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 RHOT1Q8IXI2 618 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 UMODL1-AS1Q8N2C9 162 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 STK40Q8N2I9 435 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 NETO2Q8NC67 525 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 GANCQ8TET4 914 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 GAB3Q8WWW8 586 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 NKD2Q969F2 451 aaPredicted RBP16.1■□□□□ 0.17
BRAT1-202ENST00000421712 HMCESQ96FZ2 354 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 SLC39A8Q9C0K1 460 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 GOLPH3Q9H4A6 298 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 NOL6Q9H6R4 1146 aaKnown RBP16.1■□□□□ 0.17
BRAT1-202ENST00000421712 FBRSQ9HAH7 460 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 HS3ST2Q9Y278 367 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 FARP1Q9Y4F1 1045 aaPredicted RBP16.1■□□□□ 0.17
BRAT1-202ENST00000421712 ALG6Q9Y672 507 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 NUP205Q92621 2012 aa16.1■□□□□ 0.17
BRAT1-202ENST00000421712 MUC6Q6W4X9 2439 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 LRRD1A4D1F6 860 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 DCLK1O15075 740 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 ZNF217O75362 1048 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 ZMPSTE24O75844 475 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 DNTTP04053 509 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 VAV1P15498 845 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 RECQLP46063 649 aaPredicted RBP16.09■□□□□ 0.17
BRAT1-202ENST00000421712 COPAP53621 1224 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 GEMIN4P57678 1058 aaKnown RBP16.09■□□□□ 0.17
BRAT1-202ENST00000421712 ARF5P84085 180 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 DPYSL3Q14195 570 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 LPAL2Q16609 132 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 IFI16Q16666 785 aaKnown RBP16.09■□□□□ 0.17
BRAT1-202ENST00000421712 ZNF776Q68DI1 518 aaPredicted RBP16.09■□□□□ 0.17
BRAT1-202ENST00000421712 Q6ZVU0 165 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 LZTR1Q8N653 840 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 TPCN2Q8NHX9 752 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms