RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 POLR1BQ9H9Y6 1135 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 POLE3Q9NRF9 147 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 ADPRHL2Q9NX46 363 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 GTF2A1LQ9UNN4 478 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 OR10H2O60403 315 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 CPA3P15088 417 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 TTC33Q6PID6 262 aaPredicted RBP11.29□□□□□ -0.6
FN1-207ENST00000421182 R3HCC1LQ7Z5L2 792 aaKnown RBP11.29□□□□□ -0.6
FN1-207ENST00000421182 MIER2Q8N344 545 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 ACOX2Q99424 681 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 OLFM1Q99784 485 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 ZNF112Q9UJU3 913 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 IRF6O14896 467 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 ORC1Q13415 861 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 BATF3Q9NR55 127 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 ARL15Q9NXU5 204 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 SHROOM3Q8TF72 1996 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 TSPAN3O60637 253 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 BRMS1LQ5PSV4 323 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 RAET1GQ6H3X3 334 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 CASP12Q6UXS9 341 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 MILR1Q7Z6M3 343 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 ZSCAN18Q8TBC5 510 aaPredicted RBP11.29□□□□□ -0.6
FN1-207ENST00000421182 COLEC10Q9Y6Z7 277 aa11.29□□□□□ -0.6
FN1-207ENST00000421182 APOC4-APOC2K7ER74 178 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 ECDO95905 644 aaPredicted RBP11.28□□□□□ -0.6
FN1-207ENST00000421182 APOC2P02655 101 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 AFTPHQ6ULP2 937 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 BNC2Q6ZN30 1099 aaPredicted RBP11.28□□□□□ -0.6
FN1-207ENST00000421182 SCAIQ8N9R8 606 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 FNDC5Q8NAU1 212 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 ACTL9Q8TC94 416 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 IL17RAQ96F46 866 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 EXOSC4Q9NPD3 245 aaKnown RBP11.28□□□□□ -0.6
FN1-207ENST00000421182 CNGB3Q9NQW8 809 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 STX4Q12846 297 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 TAF13Q15543 124 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 FAM187BQ17R55 369 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 LPCAT2Q7L5N7 544 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 ZNF473Q8WTR7 871 aaKnown RBP11.28□□□□□ -0.6
FN1-207ENST00000421182 CICQ96RK0 1608 aaPredicted RBP11.28□□□□□ -0.6
FN1-207ENST00000421182 ZNFX1Q9P2E3 1918 aaKnown RBP11.28□□□□□ -0.6
FN1-207ENST00000421182 SPATA31C2B4DYI2 1134 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 TERF2Q15554 542 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 MICU2Q8IYU8 434 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 APOL4Q9BPW4 351 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 SYT17Q9BSW7 474 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 THAP1Q9NVV9 213 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 NR5A2O00482 541 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 CHADO15335 359 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 CPSF4O95639 269 aaKnown RBP11.28□□□□□ -0.6
FN1-207ENST00000421182 CASP4P49662 377 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 ACTN3Q08043 901 aaPredicted RBP11.28□□□□□ -0.6
FN1-207ENST00000421182 RRP1BQ14684 758 aaKnown RBP11.28□□□□□ -0.6
FN1-207ENST00000421182 PSMD5Q16401 504 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 PARP6Q2NL67 630 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 GJB7Q6PEY0 223 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 COMMD2Q86X83 199 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 PHYKPLQ8IUZ5 450 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 RACGAP1Q9H0H5 632 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 ZNHIT2Q9UHR6 403 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 STX11O75558 287 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 ZNF682O95780 498 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 LLGL2Q6P1M3 1020 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 OR12D3Q9UGF7 316 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 ALPPL2P10696 532 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 SELPP16109 830 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 SMIM11AP58511 58 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 PTENP60484 403 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 ITGA7Q13683 1181 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 CSHL1Q14406 222 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 TOP6BLQ8N6T0 577 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 STAG3L4Q8TBR4 150 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 MORF4L1Q9UBU8 362 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 KLHL3Q9UH77 587 aa11.28□□□□□ -0.6
FN1-207ENST00000421182 GRM6O15303 877 aa11.27□□□□□ -0.6
FN1-207ENST00000421182 SKAP2O75563 359 aaPredicted RBP11.27□□□□□ -0.6
FN1-207ENST00000421182 KRT33AO76009 404 aa11.27□□□□□ -0.6
FN1-207ENST00000421182 S100GP29377 79 aa11.27□□□□□ -0.6
FN1-207ENST00000421182 SERPINB5P36952 375 aa11.27□□□□□ -0.6
FN1-207ENST00000421182 ZFP1Q6P2D0 407 aa11.27□□□□□ -0.6
FN1-207ENST00000421182 GALNT18Q6P9A2 607 aa11.27□□□□□ -0.6
FN1-207ENST00000421182 RP9Q8TA86 221 aaKnown RBP11.27□□□□□ -0.6
FN1-207ENST00000421182 ACTRT2Q8TDY3 377 aa11.27□□□□□ -0.6
FN1-207ENST00000421182 FAM86B1E9PN63 330 aa11.27□□□□□ -0.6
FN1-207ENST00000421182 FAM86B2P0C5J1 330 aa11.27□□□□□ -0.6
FN1-207ENST00000421182 DSG1Q02413 1049 aa11.27□□□□□ -0.6
FN1-207ENST00000421182 CRY1Q16526 586 aa11.27□□□□□ -0.6
FN1-207ENST00000421182 TPGS1Q6ZTW0 290 aa11.27□□□□□ -0.6
FN1-207ENST00000421182 ATG16L2Q8NAA4 619 aa11.27□□□□□ -0.6
FN1-207ENST00000421182 SPPL2BQ8TCT7 592 aa11.27□□□□□ -0.6
FN1-207ENST00000421182 HNRNPLLQ8WVV9 542 aaKnown RBP11.27□□□□□ -0.6
FN1-207ENST00000421182 CCT8L1PA6NM43 557 aa11.27□□□□□ -0.61
FN1-207ENST00000421182 H3BQF6 201 aa11.27□□□□□ -0.61
FN1-207ENST00000421182 UBDO15205 165 aa11.27□□□□□ -0.61
FN1-207ENST00000421182 DUSP11O75319 330 aaKnown RBP11.27□□□□□ -0.61
FN1-207ENST00000421182 MAFO75444 373 aaPredicted RBP11.27□□□□□ -0.61
FN1-207ENST00000421182 HSD17B3P37058 310 aa11.27□□□□□ -0.61
FN1-207ENST00000421182 FUT11Q495W5 492 aa11.27□□□□□ -0.61
FN1-207ENST00000421182 FAM45AQ8TCE6 357 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms