RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ADAM33Q9BZ11 813 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 ING2Q9H160 280 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.92□□□□□ -0.66
PTCH1-206ENST00000421141 C1orf232A0A0U1RR37 186 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 A0A1W2PQ67 120 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 PSMD8P48556 350 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 PRIM2P49643 509 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 MGAT5Q09328 741 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 PARP6Q2NL67 630 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 ZNF384Q8TF68 577 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 MRPL46Q9H2W6 279 aaKnown RBP10.92□□□□□ -0.66
PTCH1-206ENST00000421141 ASB8Q9H765 288 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 CYLDQ9NQC7 956 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 SHOC2Q9UQ13 582 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 ATAD5Q96QE3 1844 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 GTF2A1P52655 376 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-206ENST00000421141 GAD2Q05329 585 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 SLC29A2Q14542 456 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 PHF13Q86YI8 300 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-206ENST00000421141 HEXDCQ8WVB3 486 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 FUBP3Q96I24 572 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTCH1-206ENST00000421141 GANQ9H2C0 597 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 ACTR8Q9H981 624 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 INTS7Q9NVH2 962 aaKnown RBP10.92□□□□□ -0.66
PTCH1-206ENST00000421141 AGO1Q9UL18 857 aaKnown RBP10.92□□□□□ -0.66
PTCH1-206ENST00000421141 CES2O00748 559 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 WARSP23381 471 aaKnown RBP10.92□□□□□ -0.66
PTCH1-206ENST00000421141 ELP6Q0PNE2 266 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 CDC16Q13042 620 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 LDLRAD1Q5T700 205 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 CYP20A1Q6UW02 462 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 PHYKPLQ8IUZ5 450 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 PSTKQ8IV42 348 aaKnown RBP10.92□□□□□ -0.66
PTCH1-206ENST00000421141 NAF1Q96HR8 494 aaKnown RBP10.92□□□□□ -0.66
PTCH1-206ENST00000421141 ST6GALNAC4Q9H4F1 302 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 STXBP5LQ9Y2K9 1186 aa10.92□□□□□ -0.66
PTCH1-206ENST00000421141 FAM237AA0A1B0GTK4 181 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 SLC38A8A6NNN8 435 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 SEC13P55735 322 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 INPP5AQ14642 412 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 RRP1BQ14684 758 aaKnown RBP10.91□□□□□ -0.66
PTCH1-206ENST00000421141 INAVAQ3KP66 663 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 ZDHHC20Q5W0Z9 365 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 LVRNQ6Q4G3 990 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 CHST9Q7L1S5 443 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 DET1Q7L5Y6 550 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 STRADAQ7RTN6 431 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 HIPK4Q8NE63 616 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 ARMC7Q9H6L4 198 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 RMND5AQ9H871 391 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 GPN3Q9UHW5 284 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-206ENST00000421141 ERVW-1Q9UQF0 538 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 ACOT9Q9Y305 439 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 A0A0A0MRY4 1105 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 FGF18O76093 207 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 F2P00734 622 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 DGKAP23743 735 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 USP4Q13107 963 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 TCEA2Q15560 299 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 CHI3L2Q15782 390 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 PAGE2BQ5JRK9 111 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 C12orf50Q8NA57 414 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-206ENST00000421141 SPATA13Q96N96 652 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 ANKRD6Q9Y2G4 727 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 NRP1O14786 923 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 LCLAT1Q6UWP7 414 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 C16orf89Q6UX73 402 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 BEND7Q8N7W2 519 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-206ENST00000421141 FCRL2Q96LA5 508 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-206ENST00000421141 DZANK1Q9NVP4 752 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 CDV3Q9UKY7 258 aaKnown RBP10.91□□□□□ -0.66
PTCH1-206ENST00000421141 PADI4Q9UM07 663 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 KLHL2O95198 593 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 SNAI1O95863 264 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-206ENST00000421141 PRNPP04156 253 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 RFC1P35251 1148 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-206ENST00000421141 PDCD2Q16342 344 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-206ENST00000421141 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.91□□□□□ -0.66
PTCH1-206ENST00000421141 MORC2Q9Y6X9 1032 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-206ENST00000421141 TMEM114B3SHH9 223 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 PIK3CGP48736 1102 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 SP2Q02086 613 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 TMC5Q6UXY8 1006 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 ELMO1Q92556 727 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 EPC1Q9H2F5 836 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 IL23AQ9NPF7 189 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 SHROOM3Q8TF72 1996 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 MGAT1P26572 445 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 AP2B1P63010 937 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 AGBL2Q5U5Z8 902 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 HLA-DQA1Q5Y7H0 255 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 ANKS1BQ7Z6G8 1248 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 SETD3Q86TU7 594 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-206ENST00000421141 ZBTB10Q96DT7 871 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 MANSC1Q9H8J5 431 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 NMRAL1Q9HBL8 299 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 NCKIPSDQ9NZQ3 722 aa10.91□□□□□ -0.66
PTCH1-206ENST00000421141 WDR27A2RRH5 827 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 C4BPAP04003 597 aaKnown RBP10.9□□□□□ -0.66
PTCH1-206ENST00000421141 OR4Q2P0C623 313 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms