RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 TXNDC8Q6A555 127 aa21.41■■□□□ 1.02
GPC1-202ENST00000420138 TIGD7Q6NT04 549 aaPredicted RBP21.41■■□□□ 1.02
GPC1-202ENST00000420138 OTOP3Q7RTS5 596 aa21.41■■□□□ 1.02
GPC1-202ENST00000420138 CFAP52Q8N1V2 620 aa21.41■■□□□ 1.02
GPC1-202ENST00000420138 ARNTL2Q8WYA1 636 aa21.41■■□□□ 1.02
GPC1-202ENST00000420138 OXNAD1Q96HP4 312 aaPredicted RBP21.41■■□□□ 1.02
GPC1-202ENST00000420138 XPO6Q96QU8 1125 aaKnown RBP21.41■■□□□ 1.02
GPC1-202ENST00000420138 STMN4Q9H169 189 aaPredicted RBP21.41■■□□□ 1.02
GPC1-202ENST00000420138 CNOT10Q9H9A5 744 aaKnown RBP21.41■■□□□ 1.02
GPC1-202ENST00000420138 TLR9Q9NR96 1032 aa21.41■■□□□ 1.02
GPC1-202ENST00000420138 FETUBQ9UGM5 382 aa21.41■■□□□ 1.02
GPC1-202ENST00000420138 ZC3H7BQ9UGR2 993 aaKnown RBP21.41■■□□□ 1.02
GPC1-202ENST00000420138 MTCL1Q9Y4B5 1905 aaKnown RBP21.41■■□□□ 1.02
GPC1-202ENST00000420138 J3KR12 359 aa21.4■■□□□ 1.02
GPC1-202ENST00000420138 RB1P06400 928 aa21.4■■□□□ 1.02
GPC1-202ENST00000420138 MAPKAPK2P49137 400 aa21.4■■□□□ 1.02
GPC1-202ENST00000420138 CLCN4P51793 760 aa21.4■■□□□ 1.02
GPC1-202ENST00000420138 SARNPP82979 210 aaKnown RBP21.4■■□□□ 1.02
GPC1-202ENST00000420138 RASA2Q15283 850 aa21.4■■□□□ 1.02
GPC1-202ENST00000420138 PABPC1LQ4VXU2 614 aaKnown RBP21.4■■□□□ 1.02
GPC1-202ENST00000420138 CCDC149Q6ZUS6 474 aa21.4■■□□□ 1.02
GPC1-202ENST00000420138 EPN3Q9H201 632 aa21.4■■□□□ 1.02
GPC1-202ENST00000420138 PIH1D1Q9NWS0 290 aaKnown RBP21.4■■□□□ 1.02
GPC1-202ENST00000420138 SMPD4Q9NXE4 827 aa21.4■■□□□ 1.02
GPC1-202ENST00000420138 STOML2Q9UJZ1 356 aa21.4■■□□□ 1.02
GPC1-202ENST00000420138 TTLL3Q9Y4R7 772 aa21.4■■□□□ 1.02
GPC1-202ENST00000420138 NYNRINQ9P2P1 1898 aaKnown RBP21.39■■□□□ 1.02
GPC1-202ENST00000420138 POC1B-GALNT4F8VUJ3 575 aa21.39■■□□□ 1.02
GPC1-202ENST00000420138 LRG1P02750 347 aa21.39■■□□□ 1.02
GPC1-202ENST00000420138 GABRR2P28476 465 aa21.39■■□□□ 1.02
GPC1-202ENST00000420138 IRS1P35568 1242 aa21.39■■□□□ 1.02
GPC1-202ENST00000420138 SGSHP51688 502 aa21.39■■□□□ 1.02
GPC1-202ENST00000420138 UNC5AQ6ZN44 842 aa21.39■■□□□ 1.02
GPC1-202ENST00000420138 RIBC1Q8N443 379 aaPredicted RBP21.39■■□□□ 1.02
GPC1-202ENST00000420138 ARL14EPQ8N8R7 260 aaPredicted RBP21.39■■□□□ 1.02
GPC1-202ENST00000420138 SLC22A17Q8WUG5 538 aa21.39■■□□□ 1.02
GPC1-202ENST00000420138 TGS1Q96RS0 853 aaKnown RBP21.39■■□□□ 1.02
GPC1-202ENST00000420138 GDF15Q99988 308 aa21.39■■□□□ 1.02
GPC1-202ENST00000420138 TRPC7Q9HCX4 862 aa21.39■■□□□ 1.02
GPC1-202ENST00000420138 TBK1Q9UHD2 729 aa21.39■■□□□ 1.02
GPC1-202ENST00000420138 ZFP37Q9Y6Q3 630 aaPredicted RBP21.39■■□□□ 1.02
GPC1-202ENST00000420138 SPAG6O75602 509 aa21.39■■□□□ 1.01
GPC1-202ENST00000420138 GLUD1P00367 558 aa21.39■■□□□ 1.01
GPC1-202ENST00000420138 HLA-DQB2P05538 268 aa21.39■■□□□ 1.01
GPC1-202ENST00000420138 IRF1P10914 325 aa21.39■■□□□ 1.01
GPC1-202ENST00000420138 MBL2P11226 248 aaPredicted RBP21.39■■□□□ 1.01
GPC1-202ENST00000420138 OR1E1P30953 314 aa21.39■■□□□ 1.01
GPC1-202ENST00000420138 RPS24P62847 133 aaKnown RBP21.39■■□□□ 1.01
GPC1-202ENST00000420138 CYP4F8P98187 520 aa21.39■■□□□ 1.01
GPC1-202ENST00000420138 PRPF39Q86UA1 669 aaKnown RBP21.39■■□□□ 1.01
GPC1-202ENST00000420138 OR52K2Q8NGK3 314 aa21.39■■□□□ 1.01
GPC1-202ENST00000420138 MICAL1Q8TDZ2 1067 aa21.39■■□□□ 1.01
GPC1-202ENST00000420138 ARHGEF2Q92974 986 aaKnown RBP21.39■■□□□ 1.01
GPC1-202ENST00000420138 CFAP36Q96G28 342 aa21.39■■□□□ 1.01
GPC1-202ENST00000420138 SAMD11Q96NU1 681 aa21.39■■□□□ 1.01
GPC1-202ENST00000420138 FCRL5Q96RD9 977 aa21.39■■□□□ 1.01
GPC1-202ENST00000420138 GLOD4Q9HC38 313 aa21.39■■□□□ 1.01
GPC1-202ENST00000420138 SLC24A2Q9UI40 661 aa21.39■■□□□ 1.01
GPC1-202ENST00000420138 YBX2Q9Y2T7 364 aaKnown RBP21.39■■□□□ 1.01
GPC1-202ENST00000420138 DOCK4Q8N1I0 1966 aa21.38■■□□□ 1.01
GPC1-202ENST00000420138 ERI2A8K979 691 aaKnown RBP21.38■■□□□ 1.01
GPC1-202ENST00000420138 TRDMT1O14717 391 aaKnown RBP21.38■■□□□ 1.01
GPC1-202ENST00000420138 GRM6O15303 877 aa21.38■■□□□ 1.01
GPC1-202ENST00000420138 RAMP2O60895 175 aa21.38■■□□□ 1.01
GPC1-202ENST00000420138 USP12O75317 370 aa21.38■■□□□ 1.01
GPC1-202ENST00000420138 CREB1P16220 341 aa21.38■■□□□ 1.01
GPC1-202ENST00000420138 ACVRL1P37023 503 aa21.38■■□□□ 1.01
GPC1-202ENST00000420138 PBX2P40425 430 aa21.38■■□□□ 1.01
GPC1-202ENST00000420138 GEMIN4P57678 1058 aaKnown RBP21.38■■□□□ 1.01
GPC1-202ENST00000420138 YBEYP58557 167 aaPredicted RBP21.38■■□□□ 1.01
GPC1-202ENST00000420138 PARP15Q460N3 678 aa21.38■■□□□ 1.01
GPC1-202ENST00000420138 ADGRF1Q5T601 910 aa21.38■■□□□ 1.01
GPC1-202ENST00000420138 OR52K1Q8NGK4 314 aa21.38■■□□□ 1.01
GPC1-202ENST00000420138 SPATA22Q8NHS9 363 aa21.38■■□□□ 1.01
GPC1-202ENST00000420138 PPCSQ9HAB8 311 aa21.38■■□□□ 1.01
GPC1-202ENST00000420138 CASS4Q9NQ75 786 aa21.38■■□□□ 1.01
GPC1-202ENST00000420138 RBM22Q9NW64 420 aaKnown RBP eCLIP21.38■■□□□ 1.01
GPC1-202ENST00000420138 UBP1Q9NZI7 540 aa21.38■■□□□ 1.01
GPC1-202ENST00000420138 ANAPC1Q9H1A4 1944 aa21.37■■□□□ 1.01
GPC1-202ENST00000420138 SDR42E2A6NKP2 422 aa21.37■■□□□ 1.01
GPC1-202ENST00000420138 CPP00450 1065 aa21.37■■□□□ 1.01
GPC1-202ENST00000420138 MGAT1P26572 445 aa21.37■■□□□ 1.01
GPC1-202ENST00000420138 IFNAR2P48551 515 aa21.37■■□□□ 1.01
GPC1-202ENST00000420138 SESN2P58004 480 aaPredicted RBP21.37■■□□□ 1.01
GPC1-202ENST00000420138 CRADDP78560 199 aa21.37■■□□□ 1.01
GPC1-202ENST00000420138 SMAD3P84022 425 aaKnown RBP21.37■■□□□ 1.01
GPC1-202ENST00000420138 SERINC3Q13530 473 aa21.37■■□□□ 1.01
GPC1-202ENST00000420138 HNRNPDQ14103 355 aaKnown RBP21.37■■□□□ 1.01
GPC1-202ENST00000420138 POLD3Q15054 466 aaPredicted RBP21.37■■□□□ 1.01
GPC1-202ENST00000420138 RETREG1Q9H6L5 497 aa21.37■■□□□ 1.01
GPC1-202ENST00000420138 RANBP2P49792 3224 aaKnown RBP21.37■■□□□ 1.01
GPC1-202ENST00000420138 GFRA2O00451 464 aa21.36■■□□□ 1.01
GPC1-202ENST00000420138 LPXNO60711 386 aa21.36■■□□□ 1.01
GPC1-202ENST00000420138 HDCP19113 662 aa21.36■■□□□ 1.01
GPC1-202ENST00000420138 PRKCHP24723 683 aa21.36■■□□□ 1.01
GPC1-202ENST00000420138 CDH4P55283 916 aa21.36■■□□□ 1.01
GPC1-202ENST00000420138 PPARDQ03181 441 aa21.36■■□□□ 1.01
GPC1-202ENST00000420138 TNK2Q07912 1038 aa21.36■■□□□ 1.01
GPC1-202ENST00000420138 KLHL38Q2WGJ6 581 aa21.36■■□□□ 1.01
GPC1-202ENST00000420138 KBTBD12Q3ZCT8 623 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms