RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 GRIP2Q9C0E4 1043 aa15.46■□□□□ 0.07
SEMA3B-203ENST00000419007 Q9H521 79 aa15.46■□□□□ 0.07
SEMA3B-203ENST00000419007 HDAC3O15379 428 aa15.46■□□□□ 0.06
SEMA3B-203ENST00000419007 STAU1O95793 577 aaKnown RBP15.46■□□□□ 0.06
SEMA3B-203ENST00000419007 GLUD2P49448 558 aa15.46■□□□□ 0.06
SEMA3B-203ENST00000419007 FBXO47Q5MNV8 452 aa15.46■□□□□ 0.06
SEMA3B-203ENST00000419007 NOL9Q5SY16 702 aaKnown RBP15.46■□□□□ 0.06
SEMA3B-203ENST00000419007 RBM44Q6ZP01 1051 aaKnown RBP15.46■□□□□ 0.06
SEMA3B-203ENST00000419007 OPTNQ96CV9 577 aa15.46■□□□□ 0.06
SEMA3B-203ENST00000419007 SGF29Q96ES7 293 aa15.46■□□□□ 0.06
SEMA3B-203ENST00000419007 HIC2Q96JB3 615 aa15.46■□□□□ 0.06
SEMA3B-203ENST00000419007 NXF3Q9H4D5 531 aaKnown RBP15.46■□□□□ 0.06
SEMA3B-203ENST00000419007 LRRC4Q9HBW1 653 aa15.46■□□□□ 0.06
SEMA3B-203ENST00000419007 LZTS1Q9Y250 596 aa15.46■□□□□ 0.06
SEMA3B-203ENST00000419007 SRGAP2BP0DMP2 458 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 ERCC2P18074 760 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 PTPN3P26045 913 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 TKTP29401 623 aaKnown RBP15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 RPL14P50914 215 aaKnown RBP15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 ITGA7Q13683 1181 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 GRM3Q14832 879 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 C6orf52Q5T4I8 152 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 OGFRL1Q5TC84 451 aaPredicted RBP15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 ARHGAP17Q68EM7 881 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 UNC93AQ86WB7 457 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 ZSCAN18Q8TBC5 510 aaPredicted RBP15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 PRPF18Q99633 342 aaKnown RBP15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 UBAP1Q9NZ09 502 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 AP4B1Q9Y6B7 739 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 ANKRD33BA6NCL7 494 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 MPOP05164 745 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 JUNP05412 331 aaKnown RBP15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 TFEBP19484 476 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 ACADSBP45954 432 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 LRRC23Q53EV4 343 aaPredicted RBP15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 C9orf57Q5W0N0 161 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 PAOXQ6QHF9 649 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 PTAR1Q7Z6K3 402 aaPredicted RBP15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 NT5DC4Q86YG4 428 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 SIX6OS1Q8N1H7 587 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 USP33Q8TEY7 942 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 KCTD4Q8WVF5 259 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 BTBD9Q96Q07 612 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 OMDQ99983 421 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 PIGVQ9NUD9 493 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 ADA2Q9NZK5 511 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 C6orf203Q9P0P8 240 aaPredicted RBP15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 ZDHHC2Q9UIJ5 367 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 ADAM28Q9UKQ2 775 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 RUVBL2Q9Y230 463 aaKnown RBP15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 LTBP3Q9NS15 1303 aa15.45■□□□□ 0.06
SEMA3B-203ENST00000419007 ZCWPW2A0A1B0GU75 182 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 MATN2O00339 956 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 SPTLC1O15269 473 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 DNAJA2O60884 412 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 CNMDO75829 334 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 RECQL4O94761 1208 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 CRTAMO95727 393 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 GLDCP23378 1020 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 PRDX6P30041 224 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 MS4A2Q01362 244 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 ARHGAP1Q07960 439 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 LSAMPQ13449 338 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 GRM2Q14416 872 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 ZNF460Q14592 562 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 METTL21CQ5VZV1 264 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 ARMC3Q5W041 872 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 HFE2Q6ZVN8 426 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 EZH1Q92800 747 aaPredicted RBP15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 MED10Q9BTT4 135 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 WDR41Q9HAD4 459 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 DDX18Q9NVP1 670 aaKnown RBP15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 OXSMQ9NWU1 459 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 IGSF9Q9P2J2 1179 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 MRPL42Q9Y6G3 142 aaKnown RBP15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 TMEM114B3SHH9 223 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 H3BRB1 525 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 CASQ2O14958 399 aaPredicted RBP15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 FBXO21O94952 628 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 AP2A1O95782 977 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 SLC25A27O95847 323 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 TPI1P60174 286 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 POU5F1BQ06416 359 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 SNAPC2Q13487 334 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 SMYD5Q6GMV2 418 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 APPL2Q8NEU8 664 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 KBTBD7Q8WVZ9 684 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 NPAS2Q99743 824 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 TUT1Q9H6E5 874 aaKnown RBP15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 GPRC5DQ9NZD1 345 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 RBPJLQ9UBG7 517 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 GJD2Q9UKL4 321 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 RAP2CQ9Y3L5 183 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 SLC4A7Q9Y6M7 1214 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 ZNF638Q14966 1978 aaKnown RBP15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 SSC5DA1L4H1 1573 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 TMEM233B4DJY2 109 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 TIMM44O43615 452 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 BEST1O76090 585 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 NFKB1P19838 968 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms