RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 LZTR1Q8N653 840 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 ATP11CQ8NB49 1132 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 OR2T3Q8NH03 318 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 ACE2Q9BYF1 805 aaPredicted RBP23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 PCDH18Q9HCL0 1135 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 PRSS16Q9NQE7 514 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 TFR2Q9UP52 801 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 HS3ST2Q9Y278 367 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 R4GN57 208 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 TTC34A8MYJ7 566 aa23.62■■□□□ 1.37
SMARCB1-205ENST00000417137 PJA2O43164 708 aa23.62■■□□□ 1.37
SMARCB1-205ENST00000417137 SPOPO43791 374 aa23.62■■□□□ 1.37
SMARCB1-205ENST00000417137 ATP9BO43861 1147 aa23.62■■□□□ 1.37
SMARCB1-205ENST00000417137 SNAP91O60641 907 aa23.62■■□□□ 1.37
SMARCB1-205ENST00000417137 STK19P49842 368 aaPredicted RBP23.62■■□□□ 1.37
SMARCB1-205ENST00000417137 CLCN6P51797 869 aa23.62■■□□□ 1.37
SMARCB1-205ENST00000417137 TAS2R40P59535 323 aa23.62■■□□□ 1.37
SMARCB1-205ENST00000417137 IFI16Q16666 785 aaKnown RBP23.62■■□□□ 1.37
SMARCB1-205ENST00000417137 ODF2Q5BJF6 829 aa23.62■■□□□ 1.37
SMARCB1-205ENST00000417137 TMPRSS6Q8IU80 811 aa23.62■■□□□ 1.37
SMARCB1-205ENST00000417137 SH2D3CQ8N5H7 860 aa23.62■■□□□ 1.37
SMARCB1-205ENST00000417137 ZNF366Q8N895 744 aa23.62■■□□□ 1.37
SMARCB1-205ENST00000417137 PRDM16Q9HAZ2 1276 aa23.62■■□□□ 1.37
SMARCB1-205ENST00000417137 FAM86C1Q9NVL1 165 aa23.62■■□□□ 1.37
SMARCB1-205ENST00000417137 RCCD1A6NED2 376 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 ZSCAN5CA6NGD5 496 aaPredicted RBP23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 KDELR3O43731 214 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 BUB1BO60566 1050 aaPredicted RBP23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 RNASEH1O60930 286 aaKnown RBP23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 ZNF217O75362 1048 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 COMTP21964 271 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 ACVRL1P37023 503 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 DPYSQ14117 519 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 DLG2Q15700 870 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 CPNE8Q86YQ8 564 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 RHOT1Q8IXI2 618 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 FAM71BQ8TC56 605 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 GAB3Q8WWW8 586 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 PRCCQ92733 491 aaPredicted RBP23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 ERLEC1Q96DZ1 483 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 SIPA1Q96FS4 1042 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 MRGPRX1Q96LB2 322 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 CSPG4P5Q96PW8 444 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 TPSD1Q9BZJ3 242 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 ALG6Q9Y672 507 aa23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 MYO18AQ92614 2054 aaKnown RBP23.61■■□□□ 1.37
SMARCB1-205ENST00000417137 ARHGAP42A6NI28 874 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 RASA4BC9J798 803 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 RASA4O43374 803 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 RPP40O75818 363 aaKnown RBP23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 ZMPSTE24O75844 475 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 ACADMP11310 421 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 NDUFV2P19404 249 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 ATP13A4Q4VNC1 1196 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 C9orf64Q5T6V5 341 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 C11orf63Q6NUN7 778 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 TMCO3Q6UWJ1 677 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 KIAA1324Q6UXG2 1013 aaKnown RBP23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 CEP68Q76N32 757 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 DAAM2Q86T65 1068 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 METTL3Q86U44 580 aaKnown RBP23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 C11orf74Q86VG3 221 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 TPCN2Q8NHX9 752 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 SPACA7Q96KW9 195 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 DESI2Q9BSY9 194 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 CALN1Q9BXU9 219 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 LACRTQ9GZZ8 138 aa23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 NOL6Q9H6R4 1146 aaKnown RBP23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 DDX56Q9NY93 547 aaKnown RBP23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 FARP1Q9Y4F1 1045 aaPredicted RBP23.6■■□□□ 1.37
SMARCB1-205ENST00000417137 HRO43593 1189 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 SIN3BO75182 1162 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 MT-CO1P00395 513 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 SRCP12931 536 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 AMPD1P23109 780 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 GLDCP23378 1020 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 ARSEP51690 589 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 COPAP53621 1224 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 ZBTB16Q05516 673 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 SERINC3Q13530 473 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 LINGO4Q6UY18 593 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 FRS2Q8WU20 508 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 TSC1Q92574 1164 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 PTPRN2Q92932 1015 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 HMCESQ96FZ2 354 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 CCDC114Q96M63 670 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 ZNF670Q9BS34 389 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 CEP44Q9C0F1 390 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 MKRN2Q9H000 416 aaKnown RBP23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 LRRC19Q9H756 370 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 RAB23Q9ULC3 237 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 DUSP10Q9Y6W6 482 aa23.59■■□□□ 1.37
SMARCB1-205ENST00000417137 DOCK4Q8N1I0 1966 aa23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 BUB1O43683 1085 aa23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 KDELR1P24390 212 aa23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 SERPINB6P35237 376 aa23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 SERPINH1P50454 418 aaKnown RBP23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 ARF5P84085 180 aa23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 SFSWAPQ12872 951 aaKnown RBP23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 SIM2Q14190 667 aaPredicted RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms