RNA–Protein interactions for RNA: ENST00000416603.1

THUMPD3-202, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-202ENST00000416603 MED10Q9BTT4 135 aa7□□□□□ -1.29
THUMPD3-202ENST00000416603 LRRC27Q9C0I9 530 aa7□□□□□ -1.29
THUMPD3-202ENST00000416603 ELOVL4Q9GZR5 314 aa7□□□□□ -1.29
THUMPD3-202ENST00000416603 TNMDQ9H2S6 317 aa7□□□□□ -1.29
THUMPD3-202ENST00000416603 DPEP3Q9H4B8 488 aa7□□□□□ -1.29
THUMPD3-202ENST00000416603 SP110Q9HB58 689 aa7□□□□□ -1.29
THUMPD3-202ENST00000416603 ZDHHC4Q9NPG8 344 aa7□□□□□ -1.29
THUMPD3-202ENST00000416603 TMEM9BQ9NQ34 198 aa7□□□□□ -1.29
THUMPD3-202ENST00000416603 ARHGEF4Q9NR80 690 aa7□□□□□ -1.29
THUMPD3-202ENST00000416603 SUCOQ9UBS9 1254 aaKnown RBP7□□□□□ -1.29
THUMPD3-202ENST00000416603 ZNF69Q9UC07 566 aa7□□□□□ -1.29
THUMPD3-202ENST00000416603 TAGLN3Q9UI15 199 aa7□□□□□ -1.29
THUMPD3-202ENST00000416603 TCFL5Q9UL49 500 aa7□□□□□ -1.29
THUMPD3-202ENST00000416603 USP24Q9UPU5 2620 aa7□□□□□ -1.29
THUMPD3-202ENST00000416603 MYO18AQ92614 2054 aaKnown RBP7□□□□□ -1.29
THUMPD3-202ENST00000416603 PI4KAP42356 2102 aa7□□□□□ -1.29
THUMPD3-202ENST00000416603 ATP8B3O60423 1300 aa7□□□□□ -1.29
THUMPD3-202ENST00000416603 ATXN2Q99700 1313 aaKnown RBP7□□□□□ -1.29
THUMPD3-202ENST00000416603 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 TCRBV21S2A2A0A5A6 115 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 ZNF840PA6NDX5 716 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 SGK1O00141 431 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 CLDN5O00501 218 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 CLIC2O15247 247 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 KAT7O95251 611 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 IRF1P10914 325 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 CPEP16870 476 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 PTPN1P18031 435 aaKnown RBP6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 GNL1P36915 607 aaPredicted RBP6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 SLC6A11P48066 632 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 PPP3CCP48454 512 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 CACNA2D1P54289 1103 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 NOP14P78316 857 aaKnown RBP6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 SLC7A9P82251 487 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 MRPS21P82921 87 aaKnown RBP6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 SHC2P98077 582 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 ZXDBP98169 803 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 CHRNEQ04844 493 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 TAF10Q12962 218 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 SLC39A14Q15043 492 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 CRY1Q16526 586 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 SNRNP35Q16560 246 aaKnown RBP6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 WDR72Q3MJ13 1102 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 EOGTQ5NDL2 527 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 FAM26FQ5R3K3 315 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 BTBD8Q5XKL5 378 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 SCARA5Q6ZMJ2 495 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 LPCAT2Q7L5N7 544 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 RASSF3Q86WH2 238 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 LSRQ86X29 649 aaPredicted RBP6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 SFTPA1Q8IWL2 248 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 NELFCDQ8IXH7 590 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 TMEFF1Q8IYR6 380 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 ANKS4BQ8N8V4 417 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 MYRIPQ8NFW9 859 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 HMGB4Q8WW32 186 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 FBXO32Q969P5 355 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 SYAP1Q96A49 352 aaPredicted RBP6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 DHRS1Q96LJ7 313 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 CEP295NLQ96MC4 621 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 CGRRF1Q99675 332 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 TTLL2Q9BWV7 592 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 NUSAP1Q9BXS6 441 aaKnown RBP6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 ZNF518BQ9C0D4 1074 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 NACA2Q9H009 215 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 RNF32Q9H0A6 362 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 RNF38Q9H0F5 515 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 KIAA1586Q9HCI6 787 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 AGPAT3Q9NRZ7 376 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 GFOD1Q9NXC2 390 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 SH3BP1Q9Y3L3 701 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 NME7Q9Y5B8 376 aa6.99□□□□□ -1.29
THUMPD3-202ENST00000416603 LAMA1P25391 3075 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 EIF3DO15371 548 aaKnown RBP eCLIP6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 TACC1O75410 805 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 RFPL1O75677 317 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 RTN3O95197 1032 aaPredicted RBP6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 OLFM2O95897 454 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 OAS1P00973 400 aaKnown RBP6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 CFIP05156 583 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 PROS1P07225 676 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 SYPP08247 313 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 FAM153BP0C7A2 387 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 C1QTNF9P0C862 333 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 HNRNPLP14866 589 aaKnown RBP eCLIP6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 YWHAQP27348 245 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 P2RY2P41231 377 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 MYL6P60660 151 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 GAD2Q05329 585 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 CYP24A1Q07973 514 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 BIRC3Q13489 604 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 AUHQ13825 339 aaKnown RBP6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 PSMD6Q15008 389 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 NR0B2Q15466 257 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 ANO4Q32M45 955 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 ZNF699Q32M78 642 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 BBS9Q3SYG4 887 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 TRIM61Q5EBN2 209 aa6.98□□□□□ -1.29
THUMPD3-202ENST00000416603 LY6G5CQ5SRR4 150 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms