RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 KMT2BQ9UMN6 2715 aaPredicted RBP18.05■□□□□ 0.48
PDLIM2-208ENST00000416159 IGLV3-10A0A075B6K4 115 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 TBC1D3DA0A087WVF3 549 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 TBC1D3IA0A087WXS9 549 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 TBC1D3EA0A087X179 549 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 TBC1D3KA0A087X1G2 549 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 TBC1D3FA6NER0 549 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 TBC1D3LB9A6J9 549 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 H0Y8X5 98 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 I6L893 689 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 KCNK3O14649 394 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 PCDHGA12O60330 932 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 CYP1A1P04798 512 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 TBC1D3HP0C7X1 549 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 SLC45A4Q5BKX6 768 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 KCNT1Q5JUK3 1230 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 C6orf118Q5T5N4 469 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 TBC1D3GQ6DHY5 549 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 TBC1D3CQ6IPX1 549 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 SASS6Q6UVJ0 657 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 BNIPLQ7Z465 357 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 PRPF39Q86UA1 669 aaKnown RBP18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 TBC1D3Q8IZP1 549 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 CFAP57Q96MR6 1250 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 PSMB7Q99436 277 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 NLRC4Q9NPP4 1024 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 AASDHPPTQ9NRN7 309 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 FAM207AQ9NSI2 230 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 FANCLQ9NW38 375 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 PPM1HQ9ULR3 514 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 SNX10Q9Y5X0 201 aa18.04■□□□□ 0.48
PDLIM2-208ENST00000416159 CEP295Q9C0D2 2601 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 PLXNA2O75051 1894 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 FAM170AA1A519 330 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 E9PAM4 449 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 GOLGA6L22H0YM25 854 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 ENDOD1O94919 500 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 SRCP12931 536 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 CD38P28907 300 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 NUDT1P36639 197 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 STAT1P42224 750 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 KLK7P49862 253 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 JAM2P57087 298 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 FMO1Q01740 532 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 TRNP1Q6NT89 227 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 TRIM72Q6ZMU5 477 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 Q6ZVU0 165 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 SLCO6A1Q86UG4 719 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 PNPLA1Q8N8W4 532 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 DCAF4L2Q8NA75 395 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 ATP11CQ8NB49 1132 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 PIP4K2CQ8TBX8 421 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 SLC20A1Q8WUM9 679 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 CCDC114Q96M63 670 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 METTL5Q9NRN9 209 aaKnown RBP18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 TMPRSS4Q9NRS4 437 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 MPP6Q9NZW5 540 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 VPS51Q9UID3 782 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 SARDHQ9UL12 918 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 ZMIZ1Q9ULJ6 1067 aa18.03■□□□□ 0.48
PDLIM2-208ENST00000416159 DOCK4Q8N1I0 1966 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 A0A1B0GTQ1 180 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 A0A1W2PR77 199 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 PLK4O00444 970 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 LATO43561 262 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 PLRG1O43660 514 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 BNIP3LO60238 219 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 SNAP91O60641 907 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 SRGAP2O75044 1071 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 MT-CO1P00395 513 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 WNT1P04628 370 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 CHRNB2P17787 502 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 MMP8P22894 467 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 OR1E1P30953 314 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 GRK6P43250 576 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 CLCN6P51797 869 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 METAP1P53582 386 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 COPB1P53618 953 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 CCDC15Q0P6D6 951 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 INAVAQ3KP66 663 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 ZNF783Q6ZMS7 281 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 FAM131BQ86XD5 332 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 SERAC1Q96JX3 654 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 ELF4Q99607 663 aaPredicted RBP18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 LIMA1Q9UHB6 759 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 USP24Q9UPU5 2620 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 BTBD3Q9Y2F9 522 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 SIK3Q9Y2K2 1263 aa18.02■□□□□ 0.48
PDLIM2-208ENST00000416159 A0A0D9SEW6 157 aa18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 ILVBLA1L0T0 632 aa18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 EPHB6O15197 1021 aa18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 RTN2O75298 545 aa18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 PPP2CBP62714 309 aa18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 PPP2CAP67775 309 aa18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 ATP11AP98196 1134 aa18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 CNTN1Q12860 1018 aa18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 ARL13BQ3SXY8 428 aa18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 NAPEPLDQ6IQ20 393 aa18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 TFAP2DQ7Z6R9 452 aa18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 EMC1Q8N766 993 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms