RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 OS9Q13438 667 aaPredicted RBP3.28□□□□□ -1.88
APP-207ENST00000415997 DRP2Q13474 957 aa3.28□□□□□ -1.88
APP-207ENST00000415997 MTMR1Q13613 665 aa3.28□□□□□ -1.88
APP-207ENST00000415997 NAB2Q15742 525 aa3.28□□□□□ -1.88
APP-207ENST00000415997 CCDC142Q17RM4 750 aa3.28□□□□□ -1.88
APP-207ENST00000415997 ASPRV1Q53RT3 343 aa3.28□□□□□ -1.88
APP-207ENST00000415997 DCAF6Q58WW2 860 aa3.28□□□□□ -1.88
APP-207ENST00000415997 FAM171A1Q5VUB5 890 aa3.28□□□□□ -1.88
APP-207ENST00000415997 KANK2Q63ZY3 851 aa3.28□□□□□ -1.88
APP-207ENST00000415997 TMEM200BQ69YZ2 307 aa3.28□□□□□ -1.88
APP-207ENST00000415997 CAPRIN2Q6IMN6 1127 aaKnown RBP3.28□□□□□ -1.88
APP-207ENST00000415997 ZSCAN25Q6NSZ9 544 aa3.28□□□□□ -1.88
APP-207ENST00000415997 EFCAB12Q6NXP0 572 aa3.28□□□□□ -1.88
APP-207ENST00000415997 LRRC71Q8N4P6 559 aa3.28□□□□□ -1.88
APP-207ENST00000415997 CISD2Q8N5K1 135 aaKnown RBP3.28□□□□□ -1.88
APP-207ENST00000415997 DEFB119Q8N690 84 aa3.28□□□□□ -1.88
APP-207ENST00000415997 METTL13Q8N6R0 699 aa3.28□□□□□ -1.88
APP-207ENST00000415997 ANKRD53Q8N9V6 530 aa3.28□□□□□ -1.88
APP-207ENST00000415997 IL17RCQ8NAC3 791 aa3.28□□□□□ -1.88
APP-207ENST00000415997 SLC25A43Q8WUT9 341 aaPredicted RBP3.28□□□□□ -1.88
APP-207ENST00000415997 ASB15Q8WXK1 588 aa3.28□□□□□ -1.88
APP-207ENST00000415997 APPBP2Q92624 585 aa3.28□□□□□ -1.88
APP-207ENST00000415997 RABGGTAQ92696 567 aa3.28□□□□□ -1.88
APP-207ENST00000415997 GCDHQ92947 438 aaPredicted RBP3.28□□□□□ -1.88
APP-207ENST00000415997 CD101Q93033 1021 aa3.28□□□□□ -1.88
APP-207ENST00000415997 SGF29Q96ES7 293 aa3.28□□□□□ -1.88
APP-207ENST00000415997 GPATCH3Q96I76 525 aa3.28□□□□□ -1.88
APP-207ENST00000415997 VCPIP1Q96JH7 1222 aa3.28□□□□□ -1.88
APP-207ENST00000415997 ZNF668Q96K58 619 aaPredicted RBP3.28□□□□□ -1.88
APP-207ENST00000415997 MAP7D2Q96T17 732 aa3.28□□□□□ -1.88
APP-207ENST00000415997 API5Q9BZZ5 524 aaKnown RBP3.28□□□□□ -1.88
APP-207ENST00000415997 ADNPQ9H2P0 1102 aa3.28□□□□□ -1.88
APP-207ENST00000415997 EBF3Q9H4W6 596 aa3.28□□□□□ -1.88
APP-207ENST00000415997 IFT122Q9HBG6 1241 aa3.28□□□□□ -1.88
APP-207ENST00000415997 ASAH2Q9NR71 780 aa3.28□□□□□ -1.88
APP-207ENST00000415997 KCNH7Q9NS40 1196 aa3.28□□□□□ -1.88
APP-207ENST00000415997 PTGFRNQ9P2B2 879 aa3.28□□□□□ -1.88
APP-207ENST00000415997 CACNG4Q9UBN1 327 aa3.28□□□□□ -1.88
APP-207ENST00000415997 NOB1Q9ULX3 412 aaKnown RBP3.28□□□□□ -1.88
APP-207ENST00000415997 CLCA2Q9UQC9 943 aa3.28□□□□□ -1.88
APP-207ENST00000415997 PCDHB1Q9Y5F3 818 aa3.28□□□□□ -1.88
APP-207ENST00000415997 CEP192Q8TEP8 1941 aa3.28□□□□□ -1.88
APP-207ENST00000415997 ANK1P16157 1881 aa3.28□□□□□ -1.88
APP-207ENST00000415997 LRRK1Q38SD2 2015 aa3.27□□□□□ -1.89
APP-207ENST00000415997 TLN2Q9Y4G6 2542 aa3.27□□□□□ -1.89
APP-207ENST00000415997 A0A087WZ62 844 aa3.27□□□□□ -1.89
APP-207ENST00000415997 UBE2QL1A1L167 161 aa3.27□□□□□ -1.89
APP-207ENST00000415997 CDRT15L2A8MXV6 281 aa3.27□□□□□ -1.89
APP-207ENST00000415997 MASP2O00187 686 aa3.27□□□□□ -1.89
APP-207ENST00000415997 CBX4O00257 560 aa3.27□□□□□ -1.89
APP-207ENST00000415997 SYNCRIPO60506 623 aaKnown RBP3.27□□□□□ -1.89
APP-207ENST00000415997 TADA2AO75478 443 aa3.27□□□□□ -1.89
APP-207ENST00000415997 VNN2O95498 520 aa3.27□□□□□ -1.89
APP-207ENST00000415997 LDLRP01130 860 aa3.27□□□□□ -1.89
APP-207ENST00000415997 PARP1P09874 1014 aaKnown RBP3.27□□□□□ -1.89
APP-207ENST00000415997 MYL4P12829 197 aa3.27□□□□□ -1.89
APP-207ENST00000415997 ARSAP15289 507 aa3.27□□□□□ -1.89
APP-207ENST00000415997 GABRG2P18507 467 aa3.27□□□□□ -1.89
APP-207ENST00000415997 PTGS2P35354 604 aa3.27□□□□□ -1.89
APP-207ENST00000415997 OPRD1P41143 372 aa3.27□□□□□ -1.89
APP-207ENST00000415997 BPIFB4P59827 614 aa3.27□□□□□ -1.89
APP-207ENST00000415997 CDC42EP1Q00587 391 aa3.27□□□□□ -1.89
APP-207ENST00000415997 ARID5AQ03989 594 aa3.27□□□□□ -1.89
APP-207ENST00000415997 ELAVL2Q12926 359 aaKnown RBP3.27□□□□□ -1.89
APP-207ENST00000415997 DNAJC3Q13217 504 aa3.27□□□□□ -1.89
APP-207ENST00000415997 TOB2Q14106 344 aaPredicted RBP3.27□□□□□ -1.89
APP-207ENST00000415997 SF3A1Q15459 793 aaKnown RBP3.27□□□□□ -1.89
APP-207ENST00000415997 KIF19Q2TAC6 998 aa3.27□□□□□ -1.89
APP-207ENST00000415997 CCDC157Q569K6 752 aa3.27□□□□□ -1.89
APP-207ENST00000415997 WDR45BQ5MNZ6 344 aa3.27□□□□□ -1.89
APP-207ENST00000415997 SYCP2LQ5T4T6 812 aa3.27□□□□□ -1.89
APP-207ENST00000415997 FHL5Q5TD97 284 aa3.27□□□□□ -1.89
APP-207ENST00000415997 FAM111BQ6SJ93 734 aa3.27□□□□□ -1.89
APP-207ENST00000415997 TIPARPQ7Z3E1 657 aaKnown RBP3.27□□□□□ -1.89
APP-207ENST00000415997 MRGPREQ86SM8 312 aa3.27□□□□□ -1.89
APP-207ENST00000415997 ZNF410Q86VK4 478 aa3.27□□□□□ -1.89
APP-207ENST00000415997 DGKHQ86XP1 1220 aa3.27□□□□□ -1.89
APP-207ENST00000415997 ELOA2Q8IYF1 753 aaPredicted RBP3.27□□□□□ -1.89
APP-207ENST00000415997 ZCCHC9Q8N567 271 aaKnown RBP3.27□□□□□ -1.89
APP-207ENST00000415997 CCDC33Q8N5R6 958 aa3.27□□□□□ -1.89
APP-207ENST00000415997 ALLCQ8N6M5 410 aa3.27□□□□□ -1.89
APP-207ENST00000415997 CNNM3Q8NE01 707 aa3.27□□□□□ -1.89
APP-207ENST00000415997 ENGASEQ8NFI3 743 aa3.27□□□□□ -1.89
APP-207ENST00000415997 BEST2Q8NFU1 509 aa3.27□□□□□ -1.89
APP-207ENST00000415997 HMGB4Q8WW32 186 aa3.27□□□□□ -1.89
APP-207ENST00000415997 ARHGAP45Q92619 1136 aa3.27□□□□□ -1.89
APP-207ENST00000415997 PTPRN2Q92932 1015 aa3.27□□□□□ -1.89
APP-207ENST00000415997 PRR11Q96HE9 360 aaPredicted RBP3.27□□□□□ -1.89
APP-207ENST00000415997 SLC46A1Q96NT5 459 aa3.27□□□□□ -1.89
APP-207ENST00000415997 CCNL2Q96S94 520 aaPredicted RBP3.27□□□□□ -1.89
APP-207ENST00000415997 MMS19Q96T76 1030 aa3.27□□□□□ -1.89
APP-207ENST00000415997 FDXACB1Q9BRP7 624 aaPredicted RBP3.27□□□□□ -1.89
APP-207ENST00000415997 GCOM2Q9BZD3 368 aaPredicted RBP3.27□□□□□ -1.89
APP-207ENST00000415997 NACAP1Q9BZK3 213 aa3.27□□□□□ -1.89
APP-207ENST00000415997 TMEM245Q9H330 911 aa3.27□□□□□ -1.89
APP-207ENST00000415997 BOLA2Q9H3K6 86 aa3.27□□□□□ -1.89
APP-207ENST00000415997 ECT2Q9H8V3 914 aa3.27□□□□□ -1.89
APP-207ENST00000415997 POLR1BQ9H9Y6 1135 aa3.27□□□□□ -1.89
APP-207ENST00000415997 SMURF1Q9HCE7 757 aa3.27□□□□□ -1.89
APP-207ENST00000415997 MSL2Q9HCI7 577 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms