RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 LENG8Q96PV6 779 aaPredicted RBP13.1□□□□□ -0.31
SCN1B-202ENST00000415950 CNGB3Q9NQW8 809 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 HACL1Q9UJ83 578 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 LSM7Q9UK45 103 aaKnown RBP13.1□□□□□ -0.31
SCN1B-202ENST00000415950 PLLPQ9Y342 182 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 GNG14A0A1W2PPG7 69 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 HS6ST1O60243 411 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 CDKN2BP42772 138 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 FAM126BQ8IXS8 530 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 DHRSXQ8N5I4 330 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 DNAJB14Q8TBM8 379 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 PLEKHO2Q8TD55 490 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 OSMRQ99650 979 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 EBNA1BP2Q99848 306 aaKnown RBP13.1□□□□□ -0.31
SCN1B-202ENST00000415950 SELENONQ9NZV5 590 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 COL20A1Q9P218 1284 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 BPGMP07738 259 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 SERPINA6P08185 405 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 ALOX15P16050 662 aaPredicted RBP13.1□□□□□ -0.31
SCN1B-202ENST00000415950 BACE1P56817 501 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 HPCAP84074 193 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 TRIP4Q15650 581 aaPredicted RBP13.1□□□□□ -0.31
SCN1B-202ENST00000415950 FBXO48Q5FWF7 155 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 GPR107Q5VW38 600 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 KYAT3Q6YP21 454 aaKnown RBP13.1□□□□□ -0.31
SCN1B-202ENST00000415950 PHF13Q86YI8 300 aaPredicted RBP13.1□□□□□ -0.31
SCN1B-202ENST00000415950 SYTL1Q8IYJ3 562 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 ZNF398Q8TD17 642 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 SLC44A1Q8WWI5 657 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 MID1IP1Q9NPA3 183 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 STK39Q9UEW8 545 aa13.1□□□□□ -0.31
SCN1B-202ENST00000415950 IGLV3-22A0A075B6J6 115 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 FAM149AA5PLN7 773 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 C19orf81C9J6K1 198 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 SLCO1B7G3V0H7 640 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 ADCY6O43306 1168 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 ZNF189O75820 626 aaPredicted RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 ABCB1P08183 1280 aaPredicted RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 INSRRP14616 1297 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 MPSTP25325 297 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 GRIA1P42261 906 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 GRIA4P48058 902 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 CLK2P49760 499 aaKnown RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 GMPSP49915 693 aaPredicted RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 EFEMP1Q12805 493 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 ARHGEF6Q15052 776 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 DGKKQ5KSL6 1271 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 TNIP2Q8NFZ5 429 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 TFAP2BQ92481 460 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 APOBEC3GQ9HC16 384 aaKnown RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 S100A14Q9HCY8 104 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 DMAC2Q9NW81 257 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 TMCC3Q9ULS5 477 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 BARX2Q9UMQ3 279 aaPredicted RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 TDRKHQ9Y2W6 561 aaKnown RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 NDUFAF1Q9Y375 327 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 ATG7O95352 703 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 TRUB2O95900 331 aaKnown RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 UQCRBP14927 111 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 MAGP20916 626 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 SOX6P35712 828 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 ST8SIA6P61647 398 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 CARTPTQ16568 116 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 MSS51Q4VC12 460 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 ARMCX4Q5H9R4 360 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 MTX3Q5HYI7 312 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 FGD2Q7Z6J4 655 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 MAB21L3Q8N8X9 362 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 FNDC5Q8NAU1 212 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 UXS1Q8NBZ7 420 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 PARVBQ9HBI1 364 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 HBS1LQ9Y450 684 aaKnown RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 ZNF536O15090 1300 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 CACNA1FO60840 1977 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 ZNF286BP0CG31 522 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 TM4SF1P30408 202 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 CD151P48509 253 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 TKTL1P51854 596 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 TP53BP2Q13625 1128 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 DLG2Q15700 870 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 TTLL9Q3SXZ7 439 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 VSIG10LQ86VR7 867 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 PQLC1Q8N2U9 271 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 RORBQ92753 470 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 COQ7Q99807 217 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 MTG1Q9BT17 334 aaPredicted RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 ACE2Q9BYF1 805 aaPredicted RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 POLR1BQ9H9Y6 1135 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 COPG2Q9UBF2 871 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 RIPK3Q9Y572 518 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 SIN3BO75182 1162 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 ZBTB11O95625 1053 aaPredicted RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 LTFP02788 710 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 MLNP12872 115 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 RPL14P50914 215 aaKnown RBP13.09□□□□□ -0.31
SCN1B-202ENST00000415950 CCR3P51677 355 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 CDH18Q13634 790 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 ALFQ53S48 1182 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 FAM47BQ8NA70 645 aa13.09□□□□□ -0.31
SCN1B-202ENST00000415950 LENG9Q96B70 501 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms