RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 LRRD1A4D1F6 860 aa14.89□□□□□ -0.03
SGCE-202ENST00000415788 NARSO43776 548 aaKnown RBP14.89□□□□□ -0.03
SGCE-202ENST00000415788 CACNG3O60359 315 aa14.89□□□□□ -0.03
SGCE-202ENST00000415788 GSTA1P08263 222 aa14.89□□□□□ -0.03
SGCE-202ENST00000415788 RHOQP17081 205 aa14.89□□□□□ -0.03
SGCE-202ENST00000415788 KDELR1P24390 212 aa14.89□□□□□ -0.03
SGCE-202ENST00000415788 HOXD9P28356 352 aaPredicted RBP14.89□□□□□ -0.03
SGCE-202ENST00000415788 EIF2DP41214 584 aaKnown RBP14.89□□□□□ -0.03
SGCE-202ENST00000415788 PPP2R5EQ16537 467 aa14.89□□□□□ -0.03
SGCE-202ENST00000415788 RWDD4Q6NW29 188 aaKnown RBP14.89□□□□□ -0.03
SGCE-202ENST00000415788 RFX8Q6ZV50 586 aa14.89□□□□□ -0.03
SGCE-202ENST00000415788 RCOR2Q8IZ40 523 aa14.89□□□□□ -0.03
SGCE-202ENST00000415788 EXD1Q8NHP7 514 aa14.89□□□□□ -0.03
SGCE-202ENST00000415788 UBLCP1Q8WVY7 318 aaPredicted RBP14.89□□□□□ -0.03
SGCE-202ENST00000415788 OTOL1A6NHN0 477 aaPredicted RBP14.88□□□□□ -0.03
SGCE-202ENST00000415788 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.88□□□□□ -0.03
SGCE-202ENST00000415788 DAPK3O43293 454 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 CEP104O60308 925 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 GJA4P35212 333 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 PEX5P50542 639 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 DNA2P51530 1060 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 OXCT1P55809 520 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 CDH18Q13634 790 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 TRADDQ15628 312 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 HOOK3Q86VS8 718 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 RALGPS2Q86X27 583 aaPredicted RBP14.88□□□□□ -0.03
SGCE-202ENST00000415788 CFAP52Q8N1V2 620 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 KRT35Q92764 455 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 MYEOVQ96EZ4 313 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 UHRF1Q96T88 793 aaPredicted RBP14.88□□□□□ -0.03
SGCE-202ENST00000415788 CALN1Q9BXU9 219 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 MAGEB5Q9BZ81 275 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 PRDM16Q9HAZ2 1276 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 PACSIN2Q9UNF0 486 aaPredicted RBP14.88□□□□□ -0.03
SGCE-202ENST00000415788 NEU3Q9UQ49 428 aa14.88□□□□□ -0.03
SGCE-202ENST00000415788 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.87□□□□□ -0.03
SGCE-202ENST00000415788 WASH4PA8MWX3 477 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 MGRN1O60291 552 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 LUC7L3O95232 432 aaKnown RBP14.87□□□□□ -0.03
SGCE-202ENST00000415788 GOT1P17174 413 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 CETN2P41208 172 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 SGSHP51688 502 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 COPS2P61201 443 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 ZNF177Q13360 481 aaPredicted RBP14.87□□□□□ -0.03
SGCE-202ENST00000415788 DPYSL3Q14195 570 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 CRYMQ14894 314 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 ARTNQ5T4W7 220 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 TMC3Q7Z5M5 1100 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 CPLX4Q7Z7G2 160 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 CROCCP2Q86T23 111 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 MFN1Q8IWA4 741 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 ETFBKMTQ8IXQ9 262 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 CCT6BQ92526 530 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 BHMTQ93088 406 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 TLCD1Q96CP7 247 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 CSPG4P5Q96PW8 444 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 KLHL11Q9NVR0 708 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 TMEM248Q9NWD8 314 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 PLK2Q9NYY3 685 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 MPP6Q9NZW5 540 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 WNT16Q9UBV4 365 aa14.87□□□□□ -0.03
SGCE-202ENST00000415788 NOVA2Q9UNW9 492 aaKnown RBP14.87□□□□□ -0.03
SGCE-202ENST00000415788 H0Y626 953 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 CLGNO14967 610 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 DDX3YO15523 660 aaKnown RBP14.86□□□□□ -0.03
SGCE-202ENST00000415788 DRD4P21917 467 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 MARCKSL1P49006 195 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 MAPKAPK2P49137 400 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 BYSLQ13895 437 aaKnown RBP14.86□□□□□ -0.03
SGCE-202ENST00000415788 DPYSQ14117 519 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 QPCTQ16769 361 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 GAB4Q2WGN9 574 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 ALFQ53S48 1182 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 C6orf118Q5T5N4 469 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 SETD3Q86TU7 594 aaPredicted RBP14.86□□□□□ -0.03
SGCE-202ENST00000415788 RTL3Q8N8U3 475 aaKnown RBP14.86□□□□□ -0.03
SGCE-202ENST00000415788 ANKS4BQ8N8V4 417 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 FIBINQ8TAL6 211 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 N4BP2L2Q92802 583 aaPredicted RBP14.86□□□□□ -0.03
SGCE-202ENST00000415788 FAF2Q96CS3 445 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 CHMP6Q96FZ7 201 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 CD320Q9NPF0 282 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 HEBP1Q9NRV9 189 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 BCCIPQ9P287 314 aaKnown RBP eCLIP14.86□□□□□ -0.03
SGCE-202ENST00000415788 FBXO10Q9UK96 956 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 TTC7AQ9ULT0 858 aaPredicted RBP14.86□□□□□ -0.03
SGCE-202ENST00000415788 TPX2Q9ULW0 747 aaKnown RBP14.86□□□□□ -0.03
SGCE-202ENST00000415788 TBC1D30Q9Y2I9 924 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 UTP11Q9Y3A2 253 aaKnown RBP14.86□□□□□ -0.03
SGCE-202ENST00000415788 PIAS3Q9Y6X2 628 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 C3orf70A6NLC5 250 aaPredicted RBP14.86□□□□□ -0.03
SGCE-202ENST00000415788 SPECC1L-ADORA2AF8WAN1 911 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 KRIT1O00522 736 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 CD48P09326 243 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 IL4RP24394 825 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 OR1E1P30953 314 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 CTHP32929 405 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 ITIH4Q14624 930 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 KRT71Q3SY84 523 aa14.86□□□□□ -0.03
SGCE-202ENST00000415788 SLC44A4Q53GD3 710 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms