RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 HEMGNQ9BXL5 484 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 BRD8Q9H0E9 1235 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 SNX25Q9H3E2 840 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 STN1Q9H668 368 aaKnown RBP13.53□□□□□ -0.24
HNF4A-204ENST00000415691 DTNAQ9Y4J8 743 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 C2orf71A6NGG8 1288 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 CCDC160A6NGH7 325 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 GABRDO14764 452 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 PDE5AO76074 875 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 PBX2P40425 430 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 PACS1Q6VY07 963 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 PATL1Q86TB9 770 aaKnown RBP13.53□□□□□ -0.24
HNF4A-204ENST00000415691 SLC39A11Q8N1S5 342 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 SLC25A41Q8N5S1 370 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 CATSPER1Q8NEC5 780 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 CEP70Q8NHQ1 597 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.53□□□□□ -0.24
HNF4A-204ENST00000415691 SP7Q8TDD2 431 aaPredicted RBP13.53□□□□□ -0.24
HNF4A-204ENST00000415691 ACTRT2Q8TDY3 377 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 SLC26A7Q8TE54 656 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 PYROXD1Q8WU10 500 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 TFAP2BQ92481 460 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 TMEM176AQ96HP8 235 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 RTP3Q9BQQ7 232 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 PLGRKTQ9HBL7 147 aa13.53□□□□□ -0.24
HNF4A-204ENST00000415691 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
HNF4A-204ENST00000415691 TXNDC9O14530 226 aa13.52□□□□□ -0.24
HNF4A-204ENST00000415691 DNAJA2O60884 412 aa13.52□□□□□ -0.24
HNF4A-204ENST00000415691 ODC1P11926 461 aa13.52□□□□□ -0.24
HNF4A-204ENST00000415691 CDH2P19022 906 aaPredicted RBP13.52□□□□□ -0.24
HNF4A-204ENST00000415691 WARSP23381 471 aaKnown RBP13.52□□□□□ -0.24
HNF4A-204ENST00000415691 MTTPP55157 894 aa13.52□□□□□ -0.24
HNF4A-204ENST00000415691 LRRC36Q1X8D7 754 aa13.52□□□□□ -0.24
HNF4A-204ENST00000415691 LRRC8BQ6P9F7 803 aa13.52□□□□□ -0.24
HNF4A-204ENST00000415691 CCDC80Q76M96 950 aa13.52□□□□□ -0.24
HNF4A-204ENST00000415691 MCOLN2Q8IZK6 566 aa13.52□□□□□ -0.24
HNF4A-204ENST00000415691 DQX1Q8TE96 717 aaKnown RBP13.52□□□□□ -0.24
HNF4A-204ENST00000415691 TRPC4APQ8TEL6 797 aa13.52□□□□□ -0.24
HNF4A-204ENST00000415691 SNRNP27Q8WVK2 155 aaKnown RBP13.52□□□□□ -0.24
HNF4A-204ENST00000415691 NKD2Q969F2 451 aaPredicted RBP13.52□□□□□ -0.24
HNF4A-204ENST00000415691 TTC17Q96AE7 1141 aa13.52□□□□□ -0.24
HNF4A-204ENST00000415691 HEXIM2Q96MH2 286 aaKnown RBP13.52□□□□□ -0.24
HNF4A-204ENST00000415691 FAM111AQ96PZ2 611 aa13.52□□□□□ -0.24
HNF4A-204ENST00000415691 TMEM209Q96SK2 561 aa13.52□□□□□ -0.24
HNF4A-204ENST00000415691 CORO1BQ9BR76 489 aa13.52□□□□□ -0.24
HNF4A-204ENST00000415691 ARHGEF38Q9NXL2 777 aa13.52□□□□□ -0.24
HNF4A-204ENST00000415691 PCDHB8Q9UN66 801 aa13.52□□□□□ -0.24
HNF4A-204ENST00000415691 E5RJQ4 531 aa13.52□□□□□ -0.25
HNF4A-204ENST00000415691 CYP11A1P05108 521 aa13.52□□□□□ -0.25
HNF4A-204ENST00000415691 UNGP13051 313 aaPredicted RBP13.52□□□□□ -0.25
HNF4A-204ENST00000415691 LAG3P18627 525 aa13.52□□□□□ -0.25
HNF4A-204ENST00000415691 PMLP29590 882 aa13.52□□□□□ -0.25
HNF4A-204ENST00000415691 HSPA13P48723 471 aa13.52□□□□□ -0.25
HNF4A-204ENST00000415691 PSMC1P62191 440 aaKnown RBP13.52□□□□□ -0.25
HNF4A-204ENST00000415691 YWHAEP62258 255 aaKnown RBP13.52□□□□□ -0.25
HNF4A-204ENST00000415691 WASHC5Q12768 1159 aa13.52□□□□□ -0.25
HNF4A-204ENST00000415691 KBTBD6Q86V97 674 aa13.52□□□□□ -0.25
HNF4A-204ENST00000415691 CCDC33Q8N5R6 958 aa13.52□□□□□ -0.25
HNF4A-204ENST00000415691 GLIS1Q8NBF1 620 aa13.52□□□□□ -0.25
HNF4A-204ENST00000415691 TTC13Q8NBP0 860 aa13.52□□□□□ -0.25
HNF4A-204ENST00000415691 ITPKCQ96DU7 683 aa13.52□□□□□ -0.25
HNF4A-204ENST00000415691 MRRFQ96E11 262 aaKnown RBP13.52□□□□□ -0.25
HNF4A-204ENST00000415691 NT5C1AQ9BXI3 368 aa13.52□□□□□ -0.25
HNF4A-204ENST00000415691 ALG13Q9NP73 1137 aaKnown RBP13.52□□□□□ -0.25
HNF4A-204ENST00000415691 INIPQ9NRY2 104 aa13.52□□□□□ -0.25
HNF4A-204ENST00000415691 CEPT1Q9Y6K0 416 aa13.52□□□□□ -0.25
HNF4A-204ENST00000415691 SF3B1O75533 1304 aaKnown RBP eCLIP13.51□□□□□ -0.25
HNF4A-204ENST00000415691 LINC01553A4QN01 128 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 PRR5-ARHGAP8B1AHC4 643 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 STK10O94804 968 aaKnown RBP13.51□□□□□ -0.25
HNF4A-204ENST00000415691 KLHL2O95198 593 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 EFEMP2O95967 443 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 ITGAVP06756 1048 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 CD19P15391 556 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 PCSK6P29122 969 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 GNA15P30679 374 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 PTPN7P35236 360 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 ARHGAP8P85298 464 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 EFTUD2Q15029 972 aaKnown RBP eCLIP13.51□□□□□ -0.253e-7■■□□□ 12.9
HNF4A-204ENST00000415691 RTP2Q5QGT7 225 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 SYCP2LQ5T4T6 812 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 OVOS1Q6IE37 1185 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 CAPN12Q6ZSI9 719 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 CLP1Q92989 425 aaKnown RBP13.51□□□□□ -0.25
HNF4A-204ENST00000415691 C17orf80Q9BSJ5 609 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 GRIP2Q9C0E4 1043 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 MKS1Q9NXB0 559 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 UBAP1Q9NZ09 502 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 SPG21Q9NZD8 308 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 SIRPGQ9P1W8 387 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 DNPEPQ9ULA0 475 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 YBX2Q9Y2T7 364 aaKnown RBP13.51□□□□□ -0.25
HNF4A-204ENST00000415691 ARHGAP42A6NI28 874 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 SDR42E2A6NKP2 422 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 H3BNX3 289 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 GOLGA8RI6L899 631 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 MATN2O00339 956 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 CA3P07451 260 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 ALDH1A3P47895 512 aa13.51□□□□□ -0.25
HNF4A-204ENST00000415691 CDK9P50750 372 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms