RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 SGK1O00141 431 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 KCNN4O15554 427 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 TTI1O43156 1089 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 MZF1P28698 734 aaPredicted RBP14.56□□□□□ -0.08
SF3B1-204ENST00000414963 HLA-FP30511 346 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 CD70P32970 193 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 EIF2DP41214 584 aaKnown RBP14.56□□□□□ -0.08
SF3B1-204ENST00000414963 CSKP41240 450 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 CLCN6P51797 869 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 WASHC5Q12768 1159 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 PTK6Q13882 451 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 HNRNPDQ14103 355 aaKnown RBP14.56□□□□□ -0.08
SF3B1-204ENST00000414963 P3H1Q32P28 736 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 ITPRIPL2Q3MIP1 535 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 TMCO4Q5TGY1 634 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 ASTLQ6HA08 431 aaPredicted RBP14.56□□□□□ -0.08
SF3B1-204ENST00000414963 CCDC70Q6NSX1 233 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 C4orf22Q6V702 233 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 B4GALNT4Q76KP1 1039 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 GSTA5Q7RTV2 222 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 SLC44A3Q8N4M1 653 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 TEX26Q8N6G2 289 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 DCAF4L2Q8NA75 395 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 CCHCR1Q8TD31 782 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 SEC14L1Q92503 715 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 UBXN4Q92575 508 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 ACDQ96AP0 544 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 CCDC114Q96M63 670 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 IL12RB2Q99665 862 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 ERP44Q9BS26 406 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 SPON2Q9BUD6 331 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 MUC3BQ9H195 1237 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 PCDH9Q9HC56 1237 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 LIMD1Q9UGP4 676 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 TRHDEQ9UKU6 1024 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 HPCAL4Q9UM19 191 aa14.56□□□□□ -0.08
SF3B1-204ENST00000414963 A0A0A0MRY4 1105 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 TARSL2A2RTX5 802 aaKnown RBP14.55□□□□□ -0.08
SF3B1-204ENST00000414963 J3KR12 359 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 RNF103O00237 685 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 OPHN1O60890 802 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 STK10O94804 968 aaKnown RBP14.55□□□□□ -0.08
SF3B1-204ENST00000414963 KRT14P02533 472 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 CCNB1P14635 433 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 SP100P23497 879 aaPredicted RBP14.55□□□□□ -0.08
SF3B1-204ENST00000414963 PTPN3P26045 913 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 DRG2P55039 364 aaKnown RBP14.55□□□□□ -0.08
SF3B1-204ENST00000414963 GDF10P55107 478 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 TFF2Q03403 129 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 SLC20A2Q08357 652 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 RFTN1Q14699 578 aaPredicted RBP14.55□□□□□ -0.08
SF3B1-204ENST00000414963 PPP1R7Q15435 360 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 AAK1Q2M2I8 961 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 PLEKHG6Q3KR16 790 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 TEX44Q53QW1 395 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 IL31Q6EBC2 164 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 APCDD1Q8J025 514 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 CCDC89Q8N998 374 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 MYRIPQ8NFW9 859 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 LRRN4Q8WUT4 740 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 SPATA13Q96N96 652 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 C2orf49Q9BVC5 232 aaPredicted RBP14.55□□□□□ -0.08
SF3B1-204ENST00000414963 BRD9Q9H8M2 597 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 ATP13A1Q9HD20 1204 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 ABCB8Q9NUT2 735 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 PRKAG3Q9UGI9 489 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 GGA2Q9UJY4 613 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 VPS28Q9UK41 221 aa14.55□□□□□ -0.08
SF3B1-204ENST00000414963 INTS6Q9UL03 887 aaKnown RBP14.55□□□□□ -0.08
SF3B1-204ENST00000414963 CHD5Q8TDI0 1954 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.54□□□□□ -0.08
SF3B1-204ENST00000414963 KCNK1O00180 336 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 CTIFO43310 598 aaKnown RBP14.54□□□□□ -0.08
SF3B1-204ENST00000414963 TULP3O75386 442 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 PABPC1P11940 636 aaKnown RBP14.54□□□□□ -0.08
SF3B1-204ENST00000414963 IVDP26440 423 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 GJA4P35212 333 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 RPL22P35268 128 aaKnown RBP14.54□□□□□ -0.08
SF3B1-204ENST00000414963 VASPP50552 380 aaPredicted RBP14.54□□□□□ -0.08
SF3B1-204ENST00000414963 RENBPP51606 427 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 SULT2A1Q06520 285 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 INO80DQ53TQ3 878 aaPredicted RBP14.54□□□□□ -0.08
SF3B1-204ENST00000414963 PITRM1Q5JRX3 1037 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 TEX35Q5T0J7 233 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 DUPD1Q68J44 220 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 ADIPOR2Q86V24 386 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 GLIS1Q8NBF1 620 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 WFIKKN2Q8TEU8 576 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 CASKIN2Q8WXE0 1202 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 RUBCNQ92622 972 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 DNASE1L2Q92874 299 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 TTC17Q96AE7 1141 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 TEKT5Q96M29 485 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 RAB17Q9H0T7 212 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 SP110Q9HB58 689 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 DNAJC17Q9NVM6 304 aaKnown RBP14.54□□□□□ -0.08
SF3B1-204ENST00000414963 GTSE1Q9NYZ3 720 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 PAK5Q9P286 719 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 DEC1Q9P2X7 70 aa14.54□□□□□ -0.08
SF3B1-204ENST00000414963 DMGDHQ9UI17 866 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms