RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 ATP11CQ8NB49 1132 aa14.98□□□□□ -0.01
LIMS1-206ENST00000414829 OR52K2Q8NGK3 314 aa14.98□□□□□ -0.01
LIMS1-206ENST00000414829 ARHGEF2Q92974 986 aaKnown RBP14.98□□□□□ -0.01
LIMS1-206ENST00000414829 SIPA1Q96FS4 1042 aa14.98□□□□□ -0.01
LIMS1-206ENST00000414829 MRGPRX3Q96LB0 322 aa14.98□□□□□ -0.01
LIMS1-206ENST00000414829 MRGPRX1Q96LB2 322 aa14.98□□□□□ -0.01
LIMS1-206ENST00000414829 KCTD15Q96SI1 283 aaPredicted RBP14.98□□□□□ -0.01
LIMS1-206ENST00000414829 ACE2Q9BYF1 805 aaPredicted RBP14.98□□□□□ -0.01
LIMS1-206ENST00000414829 TSGA10Q9BZW7 698 aa14.98□□□□□ -0.01
LIMS1-206ENST00000414829 CD248Q9HCU0 757 aa14.98□□□□□ -0.01
LIMS1-206ENST00000414829 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.98□□□□□ -0.01
LIMS1-206ENST00000414829 RAD54BQ9Y620 910 aa14.98□□□□□ -0.01
LIMS1-206ENST00000414829 R4GN57 208 aa14.98□□□□□ -0.01
LIMS1-206ENST00000414829 TMEM110-MUSTN1A8MSY1 372 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 WASH3PC4AMC7 463 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 PSTPIP1O43586 416 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 RHOBTB1O94844 696 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 DNTTP04053 509 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 GOT1P17174 413 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 OXTRP30559 389 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 PLA2G5P39877 138 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 DPP6P42658 865 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 PXNP49023 591 aaPredicted RBP14.97□□□□□ -0.01
LIMS1-206ENST00000414829 SERPINH1P50454 418 aaKnown RBP14.97□□□□□ -0.01
LIMS1-206ENST00000414829 CDH6P55285 790 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 CCDC15Q0P6D6 951 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 DPYSQ14117 519 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 SIM2Q14190 667 aaPredicted RBP14.97□□□□□ -0.01
LIMS1-206ENST00000414829 ACCSLQ4AC99 568 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 SPDYCQ5MJ68 293 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 ARTNQ5T4W7 220 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 FAM46CQ5VWP2 391 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 KIAA1211LQ6NV74 962 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 TMPRSS6Q8IU80 811 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 LRRC49Q8IUZ0 686 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 RHOT1Q8IXI2 618 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 SH2D3CQ8N5H7 860 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 PCDH20Q8N6Y1 951 aaKnown RBP14.97□□□□□ -0.01
LIMS1-206ENST00000414829 KCTD6Q8NC69 237 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 OR7D4Q8NG98 312 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 UBE2Q2Q8WVN8 375 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 OR8D1Q8WZ84 308 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 ISG20Q96AZ6 181 aaKnown RBP14.97□□□□□ -0.01
LIMS1-206ENST00000414829 MYO19Q96H55 970 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 LOXL4Q96JB6 756 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 RPL10LQ96L21 214 aaKnown RBP14.97□□□□□ -0.01
LIMS1-206ENST00000414829 CSPG4P5Q96PW8 444 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 PSMB7Q99436 277 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 PCDH18Q9HCL0 1135 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 PRSS16Q9NQE7 514 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 HAUS2Q9NVX0 235 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 DDX56Q9NY93 547 aaKnown RBP14.97□□□□□ -0.01
LIMS1-206ENST00000414829 GMEB2Q9UKD1 530 aa14.97□□□□□ -0.01
LIMS1-206ENST00000414829 SMG5Q9UPR3 1016 aaKnown RBP14.97□□□□□ -0.01
LIMS1-206ENST00000414829 C1QTNF3-AMACRE9PGA6 284 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 KDELR3O43731 214 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 ADH1BP00325 375 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 HLA-EP13747 358 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 ERCC2P18074 760 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 GJC1P36383 396 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 P2RY2P41231 377 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 CTSOP43234 321 aaPredicted RBP14.96□□□□□ -0.01
LIMS1-206ENST00000414829 NAP1L1P55209 391 aaKnown RBP14.96□□□□□ -0.01
LIMS1-206ENST00000414829 DMWDQ09019 674 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 CA9Q16790 459 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 TMCO4Q5TGY1 634 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 LAIR1Q6GTX8 287 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 C22orf39Q6P5X5 142 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 RAD9BQ6WBX8 426 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 KBTBD6Q86V97 674 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 TMEM139Q8IV31 216 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 FAM71BQ8TC56 605 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 CALN1Q9BXU9 219 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 TPSD1Q9BZJ3 242 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 RSPH9Q9H1X1 276 aaPredicted RBP14.96□□□□□ -0.01
LIMS1-206ENST00000414829 FAM86C1Q9NVL1 165 aa14.96□□□□□ -0.01
LIMS1-206ENST00000414829 POLR3BQ9NW08 1133 aaPredicted RBP14.96□□□□□ -0.01
LIMS1-206ENST00000414829 CWC15Q9P013 229 aaKnown RBP14.96□□□□□ -0.01
LIMS1-206ENST00000414829 USP36Q9P275 1121 aaKnown RBP14.96□□□□□ -0.01
LIMS1-206ENST00000414829 MYOFQ9NZM1 2061 aa14.96□□□□□ -0.02
LIMS1-206ENST00000414829 ANTXRLA6NF34 631 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 TTC34A8MYJ7 566 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 RASA4BC9J798 803 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 RASA4O43374 803 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 SNAP91O60641 907 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 SIN3BO75182 1162 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 ZMPSTE24O75844 475 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 IGLV3-19P01714 112 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 SRCP12931 536 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 STK19P49842 368 aaPredicted RBP14.95□□□□□ -0.02
LIMS1-206ENST00000414829 COPAP53621 1224 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 SERINC3Q13530 473 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 DLG2Q15700 870 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 INO80DQ53TQ3 878 aaPredicted RBP14.95□□□□□ -0.02
LIMS1-206ENST00000414829 C9orf64Q5T6V5 341 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 DAB2IPQ5VWQ8 1189 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 PRR23BQ6ZRT6 265 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 USP30Q70CQ3 517 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 DAAM2Q86T65 1068 aa14.95□□□□□ -0.02
LIMS1-206ENST00000414829 PLPP6Q8IY26 295 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms