RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 DGKAP23743 735 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 CENPCQ03188 943 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 CCDC173Q0VFZ6 552 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 KCNMA1Q12791 1236 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 DLG2Q15700 870 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 C5orf22Q49AR2 442 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 RABGAP1LQ5R372 815 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 TTI2Q6NXR4 508 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 NEK5Q6P3R8 708 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 FOXR2Q6PJQ5 311 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 Q6ZVU0 165 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 SH2D3CQ8N5H7 860 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 COL26A1Q96A83 441 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 MED15Q96RN5 788 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 GTPBP4Q9BZE4 634 aaKnown RBP12.5□□□□□ -0.41
LIMS2-210ENST00000413578 THAP9Q9H5L6 903 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 CAAP1Q9H8G2 361 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 GPR27Q9NS67 375 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 HS3ST2Q9Y278 367 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 TBC1D30Q9Y2I9 924 aa12.5□□□□□ -0.41
LIMS2-210ENST00000413578 NYNRINQ9P2P1 1898 aaKnown RBP12.49□□□□□ -0.41
LIMS2-210ENST00000413578 C1QTNF3-AMACRE9PGA6 284 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 RNF103O00237 685 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 PIAS2O75928 621 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 THEGLP0DJG4 465 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 SLC2A3P11169 496 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 NUCB2P80303 420 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 CETN1Q12798 172 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 PDCLQ13371 301 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 ZNF284Q2VY69 593 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 POM121L1PQ3SYA9 428 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 KDM7AQ6ZMT4 941 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 TRIM59Q8IWR1 403 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 WDTC1Q8N5D0 677 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 OR13H1Q8NG92 308 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 ZNF606Q8WXB4 792 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 KLHDC7BQ96G42 594 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 DHTKD1Q96HY7 919 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-210ENST00000413578 ZNF578Q96N58 590 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-210ENST00000413578 ACP6Q9NPH0 428 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 ASNSD1Q9NWL6 643 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 SLC12A6Q9UHW9 1150 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 SSUH2Q9Y2M2 353 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 ATP6V1DQ9Y5K8 247 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 TENM4Q6N022 2769 aa12.49□□□□□ -0.41
LIMS2-210ENST00000413578 MAST4O15021 2626 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 ATMQ13315 3056 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 A0A1W2PQU0 124 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 ERVH48-1M5A8F1 160 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 PSMA7O14818 248 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 OPA1O60313 960 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 SMC2O95347 1197 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 MT-CO1P00395 513 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 GP1BAP07359 652 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 GLI1P08151 1106 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 SRCP12931 536 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 PRLRP16471 622 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 BMP6P22004 513 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 CCR1P32246 355 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 MARSP56192 900 aaKnown RBP12.48□□□□□ -0.41
LIMS2-210ENST00000413578 CXADRP78310 365 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 CDK17Q00537 523 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 CFHR1Q03591 330 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 KCNH2Q12809 1159 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 AUHQ13825 339 aaKnown RBP12.48□□□□□ -0.41
LIMS2-210ENST00000413578 CCDC40Q4G0X9 1142 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 TMEM259Q4ZIN3 620 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 ARTNQ5T4W7 220 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 OTUD1Q5VV17 481 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-210ENST00000413578 GCNT7Q6ZNI0 430 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 ABI3BPQ7Z7G0 1075 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 C14orf80Q86SX3 495 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 ZNF605Q86T29 641 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 HORMAD1Q86X24 394 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 DEFB106AQ8N104 65 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 SLC22A18ASQ8N1D0 253 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 ZNF248Q8NDW4 579 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 TMIEQ8NEW7 156 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 OR2A12Q8NGT7 310 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 SNRNP27Q8WVK2 155 aaKnown RBP12.48□□□□□ -0.41
LIMS2-210ENST00000413578 SMARCE1Q969G3 411 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 ARRDC3Q96B67 414 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 IFT43Q96FT9 208 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 WBP1Q96G27 269 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 RPRD1AQ96P16 312 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-210ENST00000413578 NOX5Q96PH1 765 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 PPP1R9BQ96SB3 815 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 PSMB7Q99436 277 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 FAM204AQ9H8W3 233 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 DDIT4Q9NX09 232 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 SLC25A13Q9UJS0 675 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 ZFR2Q9UPR6 939 aaKnown RBP12.48□□□□□ -0.41
LIMS2-210ENST00000413578 HS3ST4Q9Y661 456 aa12.48□□□□□ -0.41
LIMS2-210ENST00000413578 SHROOM3Q8TF72 1996 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 BECN2A8MW95 431 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 PPP1R3GB7ZBB8 358 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 I6L893 689 aaPredicted RBP12.47□□□□□ -0.41
LIMS2-210ENST00000413578 SLC31A1O15431 190 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 CLDN11O75508 207 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 LETM1O95202 739 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms