RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 KLK6Q92876 244 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ERCC4Q92889 916 aaPredicted RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 RNF34Q969K3 372 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 AZIN2Q96A70 460 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 TMEM159Q96B96 161 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ELMO3Q96BJ8 720 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 FAXDC2Q96IV6 333 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 LMLNQ96KR4 655 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 RPL10LQ96L21 214 aaKnown RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 HEXIM2Q96MH2 286 aaKnown RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 TMEM74Q96NL1 305 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 TWNKQ96RR1 684 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 PPP1R9BQ96SB3 815 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CMKLR1Q99788 373 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 MYOCQ99972 504 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CCDC3Q9BQI4 270 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 FUCA2Q9BTY2 467 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 PANK2Q9BZ23 570 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ULBP1Q9BZM6 244 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 NIF3L1Q9GZT8 377 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 TNMDQ9H2S6 317 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 EPB41L5Q9HCM4 733 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CNGB3Q9NQW8 809 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 DYRK4Q9NR20 520 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 TMPRSS4Q9NRS4 437 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ABCC13Q9NSE7 274 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 TFIP11Q9UBB9 837 aaKnown RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 SPASTQ9UBP0 616 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 PLEKHB1Q9UF11 243 aaPredicted RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 PISDQ9UG56 409 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 INTS6Q9UL03 887 aaKnown RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 PPM1HQ9ULR3 514 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 PADI4Q9UM07 663 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 FARP1Q9Y4F1 1045 aaPredicted RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 SRPRBQ9Y5M8 271 aaKnown RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 HS3ST3A1Q9Y663 406 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 POLEQ07864 2286 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 TCHHQ07283 1943 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ANK1P16157 1881 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 HIVEP3Q5T1R4 2406 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 MYH11P35749 1972 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 MYLKQ15746 1914 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 A0A087X0B3 334 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PRAMEF33A0A0G2JMD5 474 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 POM121BA6NF01 834 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 YJEFN3A6XGL0 299 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 D6RAR5 112 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 E7ENQ6 273 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 LMO7DNF2Z398 122 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 M0QYT0 321 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 KPNA3O00505 521 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 NTN3O00634 580 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 FPGTO14772 594 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 XPO1O14980 1071 aaKnown RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SPTLC2O15270 562 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 YY2O15391 372 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CAPN5O15484 640 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 ATP9BO43861 1147 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 BNIP3LO60238 219 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PRAMEF10O60809 474 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 VPS4BO75351 444 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 KRT38O76015 456 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PCDH8O95206 1070 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PAK4O96013 591 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 IGLV3-27P01718 113 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 HLA-DRAP01903 254 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 APOEP02649 317 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PRNPP04156 253 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 RPLP0P05388 317 aaKnown RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 HGFP14210 728 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 VAV1P15498 845 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PDGFRAP16234 1089 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 GJB2P29033 226 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CCKBRP32239 447 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CHRNA3P32297 505 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PIK3CAP42336 1068 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 RECQLP46063 649 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 RABIFP47224 123 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CD97P48960 835 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 STK19P49842 368 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 VASPP50552 380 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 ATP1A2P50993 1020 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 VAMP7P51809 220 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 THOP1P52888 689 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PDX1P52945 283 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PLK1P53350 603 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 METAP1P53582 386 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 MAPK10P53779 464 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 ADKP55263 362 aaKnown RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 POLE2P56282 527 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 TAS2R38P59533 333 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 RPS21P63220 83 aaKnown RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 DLG4P78352 724 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CCL7P80098 99 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 ADIGQ0VDE8 80 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 BST2Q10589 180 aaKnown RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 KLRB1Q12918 225 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SGCGQ13326 291 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 NNTQ13423 1086 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms