RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 AP2A1O95782 977 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 GSTA2P09210 222 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 HNRNPA1P09651 372 aaKnown RBP eCLIP5.64□□□□□ -1.51
EPHA4-202ENST00000409854 GOLGA6DP0CG33 693 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 MBL2P11226 248 aaPredicted RBP5.64□□□□□ -1.51
EPHA4-202ENST00000409854 NFKB1P19838 968 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 GCAP28676 217 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 CA8P35219 290 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 ELK3P41970 407 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 SERINC3Q13530 473 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 ANO4Q32M45 955 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 KRT71Q3SY84 523 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 DNAJC21Q5F1R6 531 aaKnown RBP5.64□□□□□ -1.51
EPHA4-202ENST00000409854 RABGAP1LQ5R372 815 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 PPM1LQ5SGD2 360 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 C6orf118Q5T5N4 469 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 RNF43Q68DV7 783 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 TXNDC8Q6A555 127 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 PID1Q7Z2X4 250 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 TFAP2DQ7Z6R9 452 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 DENND1CQ8IV53 801 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 IGDCC3Q8IVU1 814 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 EPS8L3Q8TE67 593 aaKnown RBP5.64□□□□□ -1.51
EPHA4-202ENST00000409854 PYROXD1Q8WU10 500 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 MRPS31Q92665 395 aaKnown RBP5.64□□□□□ -1.51
EPHA4-202ENST00000409854 HMCESQ96FZ2 354 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 PPP1R2P1Q96PQ5 205 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 FCRL5Q96RD9 977 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 DDX50Q9BQ39 737 aaKnown RBP5.64□□□□□ -1.51
EPHA4-202ENST00000409854 PDFQ9HBH1 243 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 PLAC1Q9HBJ0 212 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 MAN1C1Q9NR34 630 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 GOLGA6AQ9NYA3 693 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 VPS18Q9P253 973 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 RSPH14Q9UHP6 348 aa5.64□□□□□ -1.51
EPHA4-202ENST00000409854 YBX2Q9Y2T7 364 aaKnown RBP5.64□□□□□ -1.51
EPHA4-202ENST00000409854 RASGRF2O14827 1237 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 MOSPD3O75425 235 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 CLDN11O75508 207 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 C1QAP02745 245 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 IVLP07476 585 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 DDX6P26196 483 aaKnown RBP eCLIP5.63□□□□□ -1.51
EPHA4-202ENST00000409854 MMP13P45452 471 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 SGSHP51688 502 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 CYP4F8P98187 520 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 IL10RBQ08334 325 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 HNRNPDQ14103 355 aaKnown RBP5.63□□□□□ -1.51
EPHA4-202ENST00000409854 BBS9Q3SYG4 887 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 STEAP4Q687X5 459 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 HTR3DQ70Z44 454 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 CIR1Q86X95 450 aaPredicted RBP5.63□□□□□ -1.51
EPHA4-202ENST00000409854 ANKMY2Q8IV38 441 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 CPXM2Q8N436 756 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 RIBC1Q8N443 379 aaPredicted RBP5.63□□□□□ -1.51
EPHA4-202ENST00000409854 PDCD7Q8N8D1 485 aaKnown RBP5.63□□□□□ -1.51
EPHA4-202ENST00000409854 ARL14EPQ8N8R7 260 aaPredicted RBP5.63□□□□□ -1.51
EPHA4-202ENST00000409854 LEMD2Q8NC56 503 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 LSM14AQ8ND56 463 aaKnown RBP5.63□□□□□ -1.51
EPHA4-202ENST00000409854 DHRS4Q9BTZ2 278 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 ACSS3Q9H6R3 686 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 CASS4Q9NQ75 786 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 ASAH2Q9NR71 780 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 IPO11Q9UI26 975 aaKnown RBP5.63□□□□□ -1.51
EPHA4-202ENST00000409854 RABGEF1Q9UJ41 708 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 TBC1D30Q9Y2I9 924 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 CPQQ9Y646 472 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.63□□□□□ -1.51
EPHA4-202ENST00000409854 ZFP37Q9Y6Q3 630 aaPredicted RBP5.63□□□□□ -1.51
EPHA4-202ENST00000409854 ZNF106Q9H2Y7 1883 aaKnown RBP5.63□□□□□ -1.51
EPHA4-202ENST00000409854 A0A1B0GVM2 712 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 TCAF2A6NFQ2 919 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 CCL16O15467 120 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 PSMD3O43242 534 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 LPXNO60711 386 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 PRAMEF11O60813 436 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 RAMP2O60895 175 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 AVILO75366 819 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 AGTP01019 485 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 JCHAINP01591 159 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 HLA-DQB2P05538 268 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 HDCP19113 662 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 OR1E1P30953 314 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 PHBP35232 272 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 CCR2P41597 374 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 GRIA1P42261 906 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 SMAD3P84022 425 aaKnown RBP5.63□□□□□ -1.51
EPHA4-202ENST00000409854 SKOR1P84550 965 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 PRSS36Q5K4E3 855 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 SYCP2LQ5T4T6 812 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 RFWD3Q6PCD5 774 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 ZNF783Q6ZMS7 281 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 KDM7AQ6ZMT4 941 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 SETD3Q86TU7 594 aaPredicted RBP5.63□□□□□ -1.51
EPHA4-202ENST00000409854 UHMK1Q8TAS1 419 aaKnown RBP5.63□□□□□ -1.51
EPHA4-202ENST00000409854 SHKBP1Q8TBC3 707 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 ARHGEF2Q92974 986 aaKnown RBP5.63□□□□□ -1.51
EPHA4-202ENST00000409854 TADA1Q96BN2 335 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 ZNF599Q96NL3 588 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 CYP2S1Q96SQ9 504 aa5.63□□□□□ -1.51
EPHA4-202ENST00000409854 LMAN2LQ9H0V9 348 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms