RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 ATP13A1Q9HD20 1204 aa18.57■□□□□ 0.56
PAX3-208ENST00000409828 SPATA6Q9NWH7 488 aaPredicted RBP18.57■□□□□ 0.56
PAX3-208ENST00000409828 SUN2Q9UH99 717 aa18.57■□□□□ 0.56
PAX3-208ENST00000409828 VPS51Q9UID3 782 aa18.57■□□□□ 0.56
PAX3-208ENST00000409828 SLC25A13Q9UJS0 675 aa18.57■□□□□ 0.56
PAX3-208ENST00000409828 HPCAL4Q9UM19 191 aa18.57■□□□□ 0.56
PAX3-208ENST00000409828 STON1Q9Y6Q2 735 aa18.57■□□□□ 0.56
PAX3-208ENST00000409828 CCDC163A0A0D9SF12 145 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 GOLGA6L9A6NEM1 432 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 RASA4BC9J798 803 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 SGK1O00141 431 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 RASA4O43374 803 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 LAMTOR5O43504 91 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 GALR2O43603 387 aaPredicted RBP18.56■□□□□ 0.56
PAX3-208ENST00000409828 KDELR3O43731 214 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 ATP9BO43861 1147 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 KRT1P04264 644 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 GJC1P36383 396 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 IL12RB1P42701 662 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 PEX5P50542 639 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 PAFAH1B3Q15102 231 aaKnown RBP18.56■□□□□ 0.56
PAX3-208ENST00000409828 SERPINA13PQ6UXR4 307 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 OR7D4Q8NG98 312 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 CASKIN2Q8WXE0 1202 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 ACOX2Q99424 681 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 FAM126AQ9BYI3 521 aaPredicted RBP18.56■□□□□ 0.56
PAX3-208ENST00000409828 FBRSQ9HAH7 460 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 LZTFL1Q9NQ48 299 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 SLC8A2Q9UPR5 921 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 EFR3BQ9Y2G0 817 aa18.56■□□□□ 0.56
PAX3-208ENST00000409828 TARSL2A2RTX5 802 aaKnown RBP18.55■□□□□ 0.56
PAX3-208ENST00000409828 ARHGAP42A6NI28 874 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 ZFXP17010 805 aaPredicted RBP18.55■□□□□ 0.56
PAX3-208ENST00000409828 RWDD2BP57060 319 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 SERINC3Q13530 473 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 STARD3Q14849 445 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 PPP2R5EQ16537 467 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 ZNF528Q3MIS6 628 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 SLC9A4Q6AI14 798 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 IL31Q6EBC2 164 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 ARHGAP12Q8IWW6 846 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 REXO1L1PQ8IX06 675 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 SH2D3CQ8N5H7 860 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 CCDC33Q8N5R6 958 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 UBL4BQ8N7F7 174 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 CYB5D2Q8WUJ1 264 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 SORCS1Q8WY21 1168 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 HES6Q96HZ4 224 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 SPON2Q9BUD6 331 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 CD248Q9HCU0 757 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 CACNA2D2Q9NY47 1150 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 RAD54BQ9Y620 910 aa18.55■□□□□ 0.56
PAX3-208ENST00000409828 NYNRINQ9P2P1 1898 aaKnown RBP18.54■□□□□ 0.56
PAX3-208ENST00000409828 A0A1W2PQF6 199 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 ANTXRLA6NF34 631 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 HOXB2P14652 356 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 PTPN7P35236 360 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 ACVRL1P37023 503 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 CDKN2BP42772 138 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 CTSOP43234 321 aaPredicted RBP18.54■□□□□ 0.56
PAX3-208ENST00000409828 ARF5P84085 180 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 MMRN1Q13201 1228 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 CAMK2GQ13555 558 aaPredicted RBP18.54■□□□□ 0.56
PAX3-208ENST00000409828 TFDP2Q14188 446 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 HNRNPA1L2Q32P51 320 aaKnown RBP18.54■□□□□ 0.56
PAX3-208ENST00000409828 FNDC3BQ53EP0 1204 aaKnown RBP18.54■□□□□ 0.56
PAX3-208ENST00000409828 INO80DQ53TQ3 878 aaPredicted RBP18.54■□□□□ 0.56
PAX3-208ENST00000409828 TFDP3Q5H9I0 405 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 MFSD7Q6UXD7 560 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 NPWQ8N729 165 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 PQLC3Q8N755 202 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 KRT35Q92764 455 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 HMCESQ96FZ2 354 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 MAK16Q9BXY0 300 aaKnown RBP18.54■□□□□ 0.56
PAX3-208ENST00000409828 CEP44Q9C0F1 390 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 SLC39A8Q9C0K1 460 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 POLMQ9NP87 494 aaPredicted RBP18.54■□□□□ 0.56
PAX3-208ENST00000409828 ETNK2Q9NVF9 386 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 KLHL11Q9NVR0 708 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 EBF1Q9UH73 591 aa18.54■□□□□ 0.56
PAX3-208ENST00000409828 MUC6Q6W4X9 2439 aa18.53■□□□□ 0.56
PAX3-208ENST00000409828 K7ESF4 209 aa18.53■□□□□ 0.56
PAX3-208ENST00000409828 CBX4O00257 560 aa18.53■□□□□ 0.56
PAX3-208ENST00000409828 SNAP91O60641 907 aa18.53■□□□□ 0.56
PAX3-208ENST00000409828 TNNT1P13805 278 aa18.53■□□□□ 0.56
PAX3-208ENST00000409828 CETN2P41208 172 aa18.53■□□□□ 0.56
PAX3-208ENST00000409828 MARCKSL1P49006 195 aa18.53■□□□□ 0.56
PAX3-208ENST00000409828 SERPINH1P50454 418 aaKnown RBP18.53■□□□□ 0.56
PAX3-208ENST00000409828 SATB1Q01826 763 aa18.53■□□□□ 0.56
PAX3-208ENST00000409828 NCBP2-AS2Q69YL0 99 aa18.53■□□□□ 0.56
PAX3-208ENST00000409828 TMEM92Q6UXU6 159 aa18.53■□□□□ 0.56
PAX3-208ENST00000409828 SPOCD1Q6ZMY3 1216 aa18.53■□□□□ 0.56
PAX3-208ENST00000409828 PLPP6Q8IY26 295 aa18.53■□□□□ 0.56
PAX3-208ENST00000409828 FANCMQ8IYD8 2048 aa18.53■□□□□ 0.56
PAX3-208ENST00000409828 MAML2Q8IZL2 1156 aaPredicted RBP18.53■□□□□ 0.56
PAX3-208ENST00000409828 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.53■□□□□ 0.56
PAX3-208ENST00000409828 NELL1Q92832 810 aa18.53■□□□□ 0.56
PAX3-208ENST00000409828 ISG20Q96AZ6 181 aaKnown RBP18.53■□□□□ 0.56
PAX3-208ENST00000409828 RNF25Q96BH1 459 aaPredicted RBP18.53■□□□□ 0.56
PAX3-208ENST00000409828 KCND1Q9NSA2 647 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms