RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 TTC34A8MYJ7 566 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 CBX4O00257 560 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 MAP3K13O43283 966 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 ATP9BO43861 1147 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 SNAP91O60641 907 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 SIN3BO75182 1162 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 MTA2O94776 668 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 DNTTP04053 509 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 OXTRP30559 389 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 PI4KAP42356 2102 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 MAGEA1P43355 309 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 NUMBP49757 651 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 STK19P49842 368 aaPredicted RBP11.16□□□□□ -0.62
CHMP3-205ENST00000409810 COPAP53621 1224 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 GSDMDP57764 484 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 YBEYP58557 167 aaPredicted RBP11.16□□□□□ -0.62
CHMP3-205ENST00000409810 SLC25A11Q02978 314 aaKnown RBP11.16□□□□□ -0.62
CHMP3-205ENST00000409810 KRT81Q14533 505 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 ELAVL3Q14576 367 aaKnown RBP11.16□□□□□ -0.62
CHMP3-205ENST00000409810 POLD3Q15054 466 aaPredicted RBP11.16□□□□□ -0.62
CHMP3-205ENST00000409810 DPYSL2Q16555 572 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 SMTNL2Q2TAL5 461 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 PARP15Q460N3 678 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 ARTNQ5T4W7 220 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 ZNF776Q68DI1 518 aaPredicted RBP11.16□□□□□ -0.62
CHMP3-205ENST00000409810 RFX8Q6ZV50 586 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 DSG4Q86SJ6 1040 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 TXLNBQ8N3L3 684 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 SH2D3CQ8N5H7 860 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 ATP11CQ8NB49 1132 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 SUMF1Q8NBK3 374 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 SLC35G2Q8TBE7 412 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 HSPH1Q92598 858 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 ARHGEF2Q92974 986 aaKnown RBP11.16□□□□□ -0.62
CHMP3-205ENST00000409810 LOXL4Q96JB6 756 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 ZC3H10Q96K80 434 aaKnown RBP11.16□□□□□ -0.62
CHMP3-205ENST00000409810 BAG1Q99933 345 aaPredicted RBP11.16□□□□□ -0.62
CHMP3-205ENST00000409810 MAGEB5Q9BZ81 275 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 CEP44Q9C0F1 390 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 MKRN2Q9H000 416 aaKnown RBP11.16□□□□□ -0.62
CHMP3-205ENST00000409810 OSGEPQ9NPF4 335 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHMP3-205ENST00000409810 SLCO3A1Q9UIG8 710 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 SHROOM3Q8TF72 1996 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 NUMA1Q14980 2115 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 TNRC6BQ9UPQ9 1833 aaKnown RBP11.15□□□□□ -0.62
CHMP3-205ENST00000409810 ARHGAP42A6NI28 874 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 SOWAHDA6NJG2 315 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 TMEM110-MUSTN1A8MSY1 372 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 ALOX15BO15296 676 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 NDUFS2O75306 463 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 NDUFA10O95299 355 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 ADH1BP00325 375 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 RETP07949 1114 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 KRT7P08729 469 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 RARAP10276 462 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 GOT1P17174 413 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 IL1R2P27930 398 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 DPP6P42658 865 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 SLC1A1P43005 524 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 RECQLP46063 649 aaPredicted RBP11.15□□□□□ -0.62
CHMP3-205ENST00000409810 HCAR3P49019 387 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 SERPINH1P50454 418 aaKnown RBP11.15□□□□□ -0.62
CHMP3-205ENST00000409810 NDST2P52849 883 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 MESDQ14696 234 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 TCEAL1Q15170 157 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 DLG2Q15700 870 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 LPAL2Q16609 132 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 CA9Q16790 459 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 MAP7D1Q3KQU3 841 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 PLK5Q496M5 336 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 KCNT1Q5JUK3 1230 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 SPDYCQ5MJ68 293 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 ZFYVE27Q5T4F4 411 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 C9orf64Q5T6V5 341 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 DAB2IPQ5VWQ8 1189 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 PMS2CLQ68D20 193 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 CYP4V2Q6ZWL3 525 aaPredicted RBP11.15□□□□□ -0.62
CHMP3-205ENST00000409810 LPCAT2Q7L5N7 544 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 ASCL5Q7RTU5 278 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 ALYREFQ86V81 257 aaKnown RBP11.15□□□□□ -0.62
CHMP3-205ENST00000409810 KBTBD6Q86V97 674 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 CACUL1Q86Y37 369 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 FAM160A2Q8N612 972 aaPredicted RBP11.15□□□□□ -0.62
CHMP3-205ENST00000409810 LZTR1Q8N653 840 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 RLN3Q8WXF3 142 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 OR8D1Q8WZ84 308 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 RUBCNQ92622 972 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 CALR3Q96L12 384 aaKnown RBP11.15□□□□□ -0.62
CHMP3-205ENST00000409810 ACE2Q9BYF1 805 aaPredicted RBP11.15□□□□□ -0.62
CHMP3-205ENST00000409810 SLC6A17Q9H1V8 727 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 RSPH9Q9H1X1 276 aaPredicted RBP11.15□□□□□ -0.62
CHMP3-205ENST00000409810 NDFIP2Q9NV92 336 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 USP36Q9P275 1121 aaKnown RBP11.15□□□□□ -0.62
CHMP3-205ENST00000409810 RCOR3Q9P2K3 495 aaPredicted RBP11.15□□□□□ -0.62
CHMP3-205ENST00000409810 CYP8B1Q9UNU6 501 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 INVSQ9Y283 1065 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 NCKAP1Q9Y2A7 1128 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 PCDHA13Q9Y5I0 950 aa11.15□□□□□ -0.62
CHMP3-205ENST00000409810 EPN1Q9Y6I3 576 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms