RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 PALMO75781 387 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 KRT38O76015 456 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 SERPING1P05155 500 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 S100A1P23297 94 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 SERPINB3P29508 390 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 LIFRP42702 1097 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 TRAPPC10P48553 1259 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 PURAQ00577 322 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 PCOLCEQ15113 449 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 ST3GAL2Q16842 350 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 ZCWPW2Q504Y3 356 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 COBLL1Q53SF7 1204 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 C6orf163Q5TEZ5 329 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 THOC7Q6I9Y2 204 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 B3GNT6Q6ZMB0 384 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 C3orf62Q6ZUJ4 267 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 LARP4Q71RC2 724 aaKnown RBP eCLIP5.66□□□□□ -1.5
CLK1-202ENST00000409403 EXOC3L1Q86VI1 746 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 CSGALNACT2Q8N6G5 542 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 ZBTB34Q8NCN2 500 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 PIK3C3Q8NEB9 887 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 ZNF398Q8TD17 642 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 DQX1Q8TE96 717 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 SNX33Q8WV41 574 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 UCMAQ8WVF2 138 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 CKAP2Q8WWK9 683 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 LPIN2Q92539 896 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 AJUBAQ96IF1 538 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 MS4A14Q96JA4 679 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 MAGEB18Q96M61 343 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 LRRC37BQ96QE4 947 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 PSMB7Q99436 277 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 CGREF1Q99674 301 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 ARPC5LQ9BPX5 153 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 C7orf25Q9BPX7 421 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 SPATA25Q9BR10 227 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 SLC26A6Q9BXS9 759 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 TXLNGYQ9BZA5 131 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 TMEM60Q9H2L4 133 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 NLRC4Q9NPP4 1024 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 AGPAT5Q9NUQ2 364 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 FGFR1OP2Q9NVK5 253 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 STX18Q9P2W9 335 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 TTC7AQ9ULT0 858 aaPredicted RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 TBC1D30Q9Y2I9 924 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 R3HDM2Q9Y2K5 976 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 MAP3K2Q9Y2U5 619 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 PFASO15067 1338 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 TMEM247A6NEH6 219 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 H3BML4 177 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 MATN2O00339 956 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 RASGRF2O14827 1237 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 ZNF263O14978 683 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 KRT1P04264 644 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 CYP1A1P04798 512 aaPredicted RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 RPLP2P05387 115 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 PIM1P11309 404 aaPredicted RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 VDRP11473 427 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 CCNE1P24864 410 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 LONP1P36776 959 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 PRCPP42785 496 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 IFNAR2P48551 515 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 TOB1P50616 345 aaPredicted RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 PRMT2P55345 433 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 HDAC4P56524 1084 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 EIF4A1P60842 406 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 IRX4P78413 519 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 IL9RQ01113 521 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 CDR2Q01850 454 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 KIF22Q14807 665 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 UBE3CQ15386 1083 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 TDRD12Q587J7 1177 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 C19orf54Q5BKX5 351 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 ABHD15Q6UXT9 468 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 CHST3Q7LGC8 479 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 TAS1R1Q7RTX1 841 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 CLEC14AQ86T13 490 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 DENND1CQ8IV53 801 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 IQCF2Q8IXL9 164 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 NUP93Q8N1F7 819 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 FITM2Q8N6M3 262 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 SCAIQ8N9R8 606 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 OR2I1PQ8NGU4 316 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 TTC17Q96AE7 1141 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 DGCR14Q96DF8 476 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 VPS50Q96JG6 964 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 CNOT6LQ96LI5 555 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 SERPINB12Q96P63 405 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 SIKE1Q9BRV8 207 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 SARGQ9BW04 601 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 TBC1D10AQ9BXI6 508 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 NACA2Q9H009 215 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 DHX36Q9H2U1 1008 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 ADAM7Q9H2U9 754 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 C11orf49Q9H6J7 331 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 AZI2Q9H6S1 392 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 BARX1Q9HBU1 254 aaPredicted RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 MAN1C1Q9NR34 630 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 SMARCAL1Q9NZC9 954 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms