RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 SPAG7O75391 227 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 SOAT2O75908 522 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 ABLIM3O94929 683 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 VNN2O95498 520 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 TBX18O95935 607 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 TIMP1P01033 207 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 IGLV3-27P01718 113 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 SOD2P04179 222 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 CSH1P0DML2 217 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 CSH2P0DML3 217 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 NFKB1P19838 968 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 LORP23490 312 aaPredicted RBP6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 MGAT1P26572 445 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 RPA3P35244 121 aaPredicted RBP6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 PBX3P40426 434 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 ALDH1A3P47895 512 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 GJA8P48165 433 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 PPP3CCP48454 512 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 PAPOLAP51003 745 aaKnown RBP6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 RENBPP51606 427 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 GEMP55040 296 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 WDR4P57081 412 aaKnown RBP6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 YBEYP58557 167 aaPredicted RBP6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 DSG1Q02413 1049 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 ZBTB17Q13105 803 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 HNRNPDQ14103 355 aaKnown RBP6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 EFTUD2Q15029 972 aaKnown RBP eCLIP6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 TAF12Q16514 161 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 CTC1Q2NKJ3 1217 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 MS4A13Q5J8X5 152 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 SPANXN3Q5MJ09 141 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 FAM182AQ5T1J6 154 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 PIK3R6Q5UE93 754 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 ARMC3Q5W041 872 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 KLHDC10Q6PID8 442 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 FBXO46Q6PJ61 603 aaPredicted RBP6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 C6orf89Q6UWU4 347 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 TIFABQ6ZNK6 161 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 RGS9BPQ6ZS82 235 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 TMEM135Q86UB9 458 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 TMEM173Q86WV6 379 aaPredicted RBP6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 MIB1Q86YT6 1006 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 C4orf33Q8N1A6 199 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 MPP5Q8N3R9 675 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 CNTD1Q8N815 330 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 STKLD1Q8NE28 680 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 GDAP1Q8TB36 358 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 GIPC2Q8TF65 315 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 DEPDC1BQ8WUY9 529 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 BCL7CQ8WUZ0 217 aaPredicted RBP6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 NSMCE1Q8WV22 266 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 ZNF689Q96CS4 500 aaPredicted RBP6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 TMEM169Q96HH4 297 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 FCRL5Q96RD9 977 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 TGS1Q96RS0 853 aaKnown RBP6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 PAIP2Q9BPZ3 127 aaKnown RBP6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 PLCD4Q9BRC7 762 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 PITPNM3Q9BZ71 974 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 IL22Q9GZX6 179 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 VPS11Q9H270 941 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 CRISPLD1Q9H336 500 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 PLAC1Q9HBJ0 212 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 GLOD4Q9HC38 313 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 TMEM248Q9NWD8 314 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 SPG21Q9NZD8 308 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 MPP6Q9NZW5 540 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 IPO11Q9UI26 975 aaKnown RBP6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 PRDM4Q9UKN5 801 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 VANGL2Q9ULK5 521 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 FAM169AQ9Y6X4 670 aa6.4□□□□□ -1.38
GTF3C3-202ENST00000409364 TTC3P53804 2025 aa6.4□□□□□ -1.39
GTF3C3-202ENST00000409364 ATXN2Q99700 1313 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 FAM237BA0A1B0GVD1 139 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 CXorf49A8MYA2 514 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 TRIM49D1C9J1S8 452 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 F5H423 210 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 LPXNO60711 386 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 PIAS1O75925 651 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 LAG3P18627 525 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 ELF1P32519 619 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 HARS2P49590 506 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 MGAT5Q09328 741 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 CDH17Q12864 832 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 IFT88Q13099 833 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 RAB33AQ14088 237 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 BTG3Q14201 252 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 ITIH4Q14624 930 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 CRYMQ14894 314 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 PDK4Q16654 411 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 QPCTQ16769 361 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 HECTD3Q5T447 861 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 ARTNQ5T4W7 220 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 FBXL22Q6P050 247 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 TRMT10BQ6PF06 316 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 SH2D5Q6ZV89 423 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 DDX53Q86TM3 631 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 CCDC117Q8IWD4 279 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 CMTR2Q8IYT2 770 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 ZNF683Q8IZ20 524 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms