RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 GRM2Q14416 872 aa17.21■□□□□ 0.35
SSB-202ENST00000409333 TAB3Q8N5C8 712 aaPredicted RBP17.21■□□□□ 0.35
SSB-202ENST00000409333 EBF3Q9H4W6 596 aa17.21■□□□□ 0.35
SSB-202ENST00000409333 MBTPS2O43462 519 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 GLDCP23378 1020 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 MZF1P28698 734 aaPredicted RBP17.2■□□□□ 0.34
SSB-202ENST00000409333 CSKP41240 450 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 FCHO2Q0JRZ9 810 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 GPS1Q13098 491 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 SMAD4Q13485 552 aaKnown RBP17.2■□□□□ 0.34
SSB-202ENST00000409333 DHCR24Q15392 516 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 P3H1Q32P28 736 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 IL31Q6EBC2 164 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 LRRC49Q8IUZ0 686 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 MFSD6LQ8IWD5 586 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 USP33Q8TEY7 942 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 E2F7Q96AV8 911 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 ELSPBP1Q96BH3 223 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 ZNF419Q96HQ0 510 aaPredicted RBP17.2■□□□□ 0.34
SSB-202ENST00000409333 FAM83CQ9BQN1 747 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 RPP25Q9BUL9 199 aaKnown RBP17.2■□□□□ 0.34
SSB-202ENST00000409333 SP110Q9HB58 689 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 ATP13A1Q9HD20 1204 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 MARK1Q9P0L2 795 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 A0A0A0MRY4 1105 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 C5orf60A6NFR6 353 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 GCATO75600 419 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 ADCY8P40145 1251 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 CARSP49589 748 aaKnown RBP17.2■□□□□ 0.34
SSB-202ENST00000409333 TNK2Q07912 1038 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 LMAN2Q12907 356 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 ANKRD20A2Q5SQ80 823 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 ANKRD20A1Q5TYW2 823 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 ANKRD20A3Q5VUR7 823 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 LEKR1Q6ZMV7 388 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 OTOP3Q7RTS5 596 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 IFT20Q8IY31 132 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 GSPT2Q8IYD1 628 aaKnown RBP17.2■□□□□ 0.34
SSB-202ENST00000409333 ZNF567Q8N184 647 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 FIBINQ8TAL6 211 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 IFT81Q8WYA0 676 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 SPATA13Q96N96 652 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 FEM1AQ9BSK4 669 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 SPON2Q9BUD6 331 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 ACE2Q9BYF1 805 aaPredicted RBP17.2■□□□□ 0.34
SSB-202ENST00000409333 GRHL1Q9NZI5 618 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 EPS15L1Q9UBC2 864 aa17.2■□□□□ 0.34
SSB-202ENST00000409333 COL4A2P08572 1712 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 OTOL1A6NHN0 477 aaPredicted RBP17.19■□□□□ 0.34
SSB-202ENST00000409333 MATN3O15232 486 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 PEX11BO96011 259 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 MYBL2P10244 700 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 CCNB1P14635 433 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 PSMC3P17980 439 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 HLA-FP30511 346 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 CD70P32970 193 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 ACTN2P35609 894 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 IL10RBQ08334 325 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 ASTLQ6HA08 431 aaPredicted RBP17.19■□□□□ 0.34
SSB-202ENST00000409333 TIGD7Q6NT04 549 aaPredicted RBP17.19■□□□□ 0.34
SSB-202ENST00000409333 WDR93Q6P2C0 686 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 ZNF783Q6ZMS7 281 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 NAT16Q8N8M0 369 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 CCHCR1Q8TD31 782 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 RUBCNQ92622 972 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 ALG14Q96F25 216 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 SNF8Q96H20 258 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 FERMT1Q9BQL6 677 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 PDFQ9HBH1 243 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 HPS4Q9NQG7 708 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 THG1LQ9NWX6 298 aaKnown RBP17.19■□□□□ 0.34
SSB-202ENST00000409333 OR51B4Q9Y5P0 310 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 ACTL7AQ9Y615 435 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 NUMBLQ9Y6R0 609 aa17.19■□□□□ 0.34
SSB-202ENST00000409333 TP73O15350 636 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 MTSS1O43312 755 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 PRAMEF11O60813 436 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 ECI2O75521 394 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 STK10O94804 968 aaKnown RBP17.18■□□□□ 0.34
SSB-202ENST00000409333 SEC31AO94979 1220 aaKnown RBP17.18■□□□□ 0.34
SSB-202ENST00000409333 NFATC1O95644 943 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 JCHAINP01591 159 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 ADH5P11766 374 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 OXCT1P55809 520 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 IFI35P80217 286 aaPredicted RBP17.18■□□□□ 0.34
SSB-202ENST00000409333 FAXCQ5TGI0 409 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 ARHGEF18Q6ZSZ5 1173 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 CCDC117Q8IWD4 279 aaPredicted RBP17.18■□□□□ 0.34
SSB-202ENST00000409333 APCDD1Q8J025 514 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 ATP2A3Q93084 1043 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 HLA-CQ95604 372 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 LMLNQ96KR4 655 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 AGAP3Q96P47 875 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 NEUROG2Q9H2A3 272 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 FAM114A2Q9NRY5 505 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 PAK5Q9P286 719 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 KLHL8Q9P2G9 620 aaPredicted RBP17.18■□□□□ 0.34
SSB-202ENST00000409333 VPS28Q9UK41 221 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 RAB21Q9UL25 225 aa17.18■□□□□ 0.34
SSB-202ENST00000409333 C2CD4DB7Z1M9 353 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms