RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.42□□□□□ -0.1
CHRNA1-204ENST00000409323 KIF18AQ8NI77 898 aa14.42□□□□□ -0.1
CHRNA1-204ENST00000409323 SLC2A11Q9BYW1 496 aa14.42□□□□□ -0.1
CHRNA1-204ENST00000409323 MAGEH1Q9H213 219 aa14.42□□□□□ -0.1
CHRNA1-204ENST00000409323 MTG2Q9H4K7 406 aa14.42□□□□□ -0.1
CHRNA1-204ENST00000409323 SP110Q9HB58 689 aa14.42□□□□□ -0.1
CHRNA1-204ENST00000409323 SEPT10Q9P0V9 454 aa14.42□□□□□ -0.1
CHRNA1-204ENST00000409323 IPO11Q9UI26 975 aaKnown RBP14.42□□□□□ -0.1
CHRNA1-204ENST00000409323 STK25O00506 426 aa14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 PDGFBP01127 241 aaPredicted RBP14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 VAV1P15498 845 aa14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 POLR2EP19388 210 aaKnown RBP14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 TIE1P35590 1138 aa14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 EIF3EP60228 445 aaKnown RBP14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 ZXDAP98168 799 aa14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 GALNT2Q10471 571 aa14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 UBXN2BQ14CS0 331 aa14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 NOMO1Q15155 1222 aa14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 PARP15Q460N3 678 aa14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 LZTR1Q8N653 840 aa14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 OLFM3Q96PB7 478 aa14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 ACOX2Q99424 681 aa14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 POLR3BQ9NW08 1133 aaPredicted RBP14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 HCN2Q9UL51 889 aa14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 DNPEPQ9ULA0 475 aa14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 EFR3BQ9Y2G0 817 aa14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 SLC27A6Q9Y2P4 619 aa14.41□□□□□ -0.1
CHRNA1-204ENST00000409323 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 WASH3PC4AMC7 463 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 F5H423 210 aaPredicted RBP14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 K7EQS6 105 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 KCNK1O00180 336 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 MAFKO60675 156 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 ZMPSTE24O75844 475 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 PRLRP16471 622 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 TARSP26639 723 aaKnown RBP14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 GRIA2P42262 883 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 KCNJ1P48048 391 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 YBEYP58557 167 aaPredicted RBP14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 C2orf27AQ580R0 203 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 TMEM196Q5HYL7 178 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 EGFLAMQ63HQ2 1017 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 KIAA0907Q7Z7F0 614 aaPredicted RBP14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 PRUNE1Q86TP1 453 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 PRELID2Q8N945 189 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 DCAF4L2Q8NA75 395 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 ACE2Q9BYF1 805 aaPredicted RBP14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 ELOVL2Q9NXB9 296 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 SLCO3A1Q9UIG8 710 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 HPCAL4Q9UM19 191 aa14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 FCF1Q9Y324 198 aaKnown RBP14.4□□□□□ -0.1
CHRNA1-204ENST00000409323 TTC24A2A3L6 582 aaPredicted RBP14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 KRIT1O00522 736 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 SMAD6O43541 496 aaKnown RBP14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 KDELR3O43731 214 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 BNIP3LO60238 219 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 CD160O95971 181 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 RBP3P10745 1247 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 HLA-EP13747 358 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 EIF2DP41214 584 aaKnown RBP14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 GRSF1Q12849 480 aaKnown RBP eCLIP14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 PTPRNQ16849 979 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 DARS2Q6PI48 645 aaKnown RBP14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 ZNF852Q6ZMS4 543 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 Q6ZS52 159 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 UBALD2Q8IYN6 164 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 ACTRT1Q8TDG2 376 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 UBE2Q2Q8WVN8 375 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 ZNF419Q96HQ0 510 aaPredicted RBP14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 EXOC2Q96KP1 924 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 TMEM121Q9BTD3 319 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 C2orf49Q9BVC5 232 aaPredicted RBP14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 TBC1D17Q9HA65 648 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 CACNA2D2Q9NY47 1150 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 DONSONQ9NYP3 566 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 WNT16Q9UBV4 365 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 ERVW-1Q9UQF0 538 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 CES2O00748 559 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 MCF2LO15068 1137 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 LIASO43766 372 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 PRAMEF11O60813 436 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 GJB3O75712 270 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 RBL1P28749 1068 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 PLK1P53350 603 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 GDF10P55107 478 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 MRPS25P82663 173 aaKnown RBP14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 ECT2LQ008S8 904 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 C2orf54Q08AI8 447 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 SLC10A7Q0GE19 358 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 PDK1Q15118 436 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 ACCSLQ4AC99 568 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 FNDC3BQ53EP0 1204 aaKnown RBP14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 PKN3Q6P5Z2 889 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 ZNF783Q6ZMS7 281 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 TAB3Q8N5C8 712 aaPredicted RBP14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 ATP11CQ8NB49 1132 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 FLCNQ8NFG4 579 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 WFIKKN2Q8TEU8 576 aa14.39□□□□□ -0.11
CHRNA1-204ENST00000409323 TFB1MQ8WVM0 346 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms