RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 CPNE1Q99829 537 aa17.16■□□□□ 0.34
SYNC-202ENST00000409190 LRRC40Q9H9A6 602 aa17.16■□□□□ 0.34
SYNC-202ENST00000409190 FZD10Q9ULW2 581 aa17.16■□□□□ 0.34
SYNC-202ENST00000409190 RALGDSQ12967 914 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 CEACAM7Q14002 265 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 CYLC2Q14093 348 aaPredicted RBP17.15■□□□□ 0.34
SYNC-202ENST00000409190 STEAP4Q687X5 459 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 ANKRD52Q8NB46 1076 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 OLFM3Q96PB7 478 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 FTHL17Q9BXU8 183 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 RLFQ13129 1914 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 H3BRB1 525 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 PTPN3P26045 913 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 PTPN9P43378 593 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 HARS2P49590 506 aaKnown RBP17.15■□□□□ 0.34
SYNC-202ENST00000409190 NME5P56597 212 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 RWDD4Q6NW29 188 aaKnown RBP17.15■□□□□ 0.34
SYNC-202ENST00000409190 GK5Q6ZS86 529 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 KBTBD6Q86V97 674 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 APBB2Q92870 758 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 RNF34Q969K3 372 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 TUT1Q9H6E5 874 aaKnown RBP17.15■□□□□ 0.34
SYNC-202ENST00000409190 RBPJLQ9UBG7 517 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 KPNA7A9QM74 516 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 XPO1O14980 1071 aaKnown RBP17.15■□□□□ 0.34
SYNC-202ENST00000409190 PTPRFP10586 1907 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 TFEBP19484 476 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 DPP6P42658 865 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 MATKP42679 507 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 TPI1P60174 286 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 MPP1Q00013 466 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 ZBTB17Q13105 803 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 FBXO47Q5MNV8 452 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 GRTP1Q5TC63 336 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 ARMCX2Q7L311 632 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 ARHGAP22Q7Z5H3 698 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 EXOC8Q8IYI6 725 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 NPWQ8N729 165 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 TTC16Q8NEE8 873 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 BEST2Q8NFU1 509 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 CEP70Q8NHQ1 597 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 SREK1Q8WXA9 508 aaKnown RBP17.15■□□□□ 0.34
SYNC-202ENST00000409190 JADE3Q92613 823 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 EZH1Q92800 747 aaPredicted RBP17.15■□□□□ 0.34
SYNC-202ENST00000409190 PKP2Q99959 881 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 PIN4Q9Y237 131 aaKnown RBP17.15■□□□□ 0.34
SYNC-202ENST00000409190 TLL2Q9Y6L7 1015 aa17.15■□□□□ 0.34
SYNC-202ENST00000409190 CRTAMO95727 393 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 MT-CYBP00156 380 aaPredicted RBP17.14■□□□□ 0.33
SYNC-202ENST00000409190 LIMK2P53671 638 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 AMIGO2Q86SJ2 522 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 LILRA2Q8N149 483 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 ZFAND2BQ8WV99 257 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 KCNN1Q92952 543 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 VRTNQ9H8Y1 702 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 WDR41Q9HAD4 459 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 GNEQ9Y223 722 aaKnown RBP17.14■□□□□ 0.33
SYNC-202ENST00000409190 HEMK1Q9Y5R4 338 aaPredicted RBP17.14■□□□□ 0.33
SYNC-202ENST00000409190 NRP1O14786 923 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 HNRNPRO43390 633 aaKnown RBP17.14■□□□□ 0.33
SYNC-202ENST00000409190 DNAJA2O60884 412 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 NCAM1P13591 858 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 RPL10P27635 214 aaKnown RBP17.14■□□□□ 0.33
SYNC-202ENST00000409190 SEPT6Q14141 434 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 DGKDQ16760 1214 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 NADK2Q4G0N4 442 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 LRRC23Q53EV4 343 aaPredicted RBP17.14■□□□□ 0.33
SYNC-202ENST00000409190 PITRM1Q5JRX3 1037 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 IPMKQ8NFU5 416 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 LIN28AQ9H9Z2 209 aaKnown RBP17.14■□□□□ 0.33
SYNC-202ENST00000409190 DDIT4Q9NX09 232 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 XPR1Q9UBH6 696 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 RGPD3A6NKT7 1758 aaPredicted RBP17.14■□□□□ 0.33
SYNC-202ENST00000409190 RGPD4Q7Z3J3 1758 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 ATP6AP2A0A1C7CYW4 349 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 C9JVG2 144 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 ATP6AP2O75787 350 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 VAPBO95292 243 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 SNX16P57768 344 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 CDKL1Q00532 357 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 C9orf57Q5W0N0 161 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 UGT2A3Q6UWM9 527 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 KBTBD7Q8WVZ9 684 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 ATP6V1E2Q96A05 226 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 CAMKK2Q96RR4 588 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 VPS33BQ9H267 617 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 IL1RL2Q9HB29 575 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 CHST12Q9NRB3 414 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 DNAJB4Q9UDY4 337 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 USP3Q9Y6I4 520 aa17.14■□□□□ 0.33
SYNC-202ENST00000409190 DFFAO00273 331 aa17.13■□□□□ 0.33
SYNC-202ENST00000409190 THRAP10827 490 aa17.13■□□□□ 0.33
SYNC-202ENST00000409190 TKTL1P51854 596 aa17.13■□□□□ 0.33
SYNC-202ENST00000409190 CCDC153Q494R4 210 aa17.13■□□□□ 0.33
SYNC-202ENST00000409190 RARS2Q5T160 578 aaKnown RBP17.13■□□□□ 0.33
SYNC-202ENST00000409190 ARHGAP18Q8N392 663 aa17.13■□□□□ 0.33
SYNC-202ENST00000409190 APPL2Q8NEU8 664 aa17.13■□□□□ 0.33
SYNC-202ENST00000409190 EXT2Q93063 718 aa17.13■□□□□ 0.33
SYNC-202ENST00000409190 RHOBTB2Q9BYZ6 727 aa17.13■□□□□ 0.33
SYNC-202ENST00000409190 ZCWPW2A0A1B0GU75 182 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms