RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 DRGXA6NNA5 263 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 GOLGA8SH3BPF8 625 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 KPNA3O00505 521 aaPredicted RBP13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 LATO43561 262 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 PLRG1O43660 514 aaKnown RBP13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 KRT3P12035 628 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 FERP16591 822 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 PTMSP20962 102 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 MMP8P22894 467 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 CTSKP43235 329 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 PTPN9P43378 593 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 ZNF135P52742 658 aaPredicted RBP13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 POLR2FP61218 127 aaKnown RBP13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 NOMO3P69849 1222 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 GRM3Q14832 879 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 TAF5Q15542 800 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 EFHC2Q5JST6 749 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 CCDC183Q5T5S1 534 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 TAF3Q5VWG9 929 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 NAA35Q5VZE5 725 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 DBX2Q6ZNG2 339 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 PLPP6Q8IY26 295 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 APCDD1Q8J025 514 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 ISG20Q96AZ6 181 aaKnown RBP13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 NAA15Q9BXJ9 866 aaKnown RBP13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 OSBPL1AQ9BXW6 950 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 VPS16Q9H269 839 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 ATP13A1Q9HD20 1204 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 ACP6Q9NPH0 428 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 FAM207AQ9NSI2 230 aaPredicted RBP13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 PIGVQ9NUD9 493 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 TAB2Q9NYJ8 693 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 SLCO3A1Q9UIG8 710 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 SNX11Q9Y5W9 270 aa13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 MUC22E2RYF6 1773 aaPredicted RBP13.17□□□□□ -0.3
SNORD88B-201ENST00000408454 PCDH15Q96QU1 1955 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 IGLV3-10A0A075B6K4 115 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 A0A1B0GTQ1 180 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 NEMP2A6NFY4 417 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 LGALS16A8MUM7 142 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 TLR4O00206 839 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 HYAL3O43820 417 aaPredicted RBP13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 SRGAP2O75044 1071 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 ADCY5O95622 1261 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 CALCAP01258 141 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 IGHV4-34P06331 123 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 NFKBIAP25963 317 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 SUOXP51687 545 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 GSCP56915 257 aaPredicted RBP13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 SNRPD1P62314 119 aaKnown RBP13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 UBXN1Q04323 297 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 KRT31Q15323 416 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 CDKAL1Q5VV42 579 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 KIAA1161Q6NSJ0 714 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 MMS22LQ6ZRQ5 1243 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 FRS2Q8WU20 508 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 NTAN1Q96AB6 310 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 IQCDQ96DY2 449 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 TRIM11Q96F44 468 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 IFT43Q96FT9 208 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 P2RY11Q96G91 374 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 VCPIP1Q96JH7 1222 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 FAM129BQ96TA1 746 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 EPAS1Q99814 870 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 OSBPL2Q9H1P3 480 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 MAGEH1Q9H213 219 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 CATSPERBQ9H7T0 1116 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 CD93Q9NPY3 652 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 SAMSN1Q9NSI8 373 aaKnown RBP13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 SEPT11Q9NVA2 429 aaKnown RBP13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 HAUS2Q9NVX0 235 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 ADAM22Q9P0K1 906 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 IL36AQ9UHA7 158 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 XPO7Q9UIA9 1087 aaKnown RBP13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 PPM1HQ9ULR3 514 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 FNDC3AQ9Y2H6 1198 aaKnown RBP13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 FRYLO94915 3013 aa13.16□□□□□ -0.3
SNORD88B-201ENST00000408454 DCHS1Q96JQ0 3298 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 H3BM21 787 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 CBX4O00257 560 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 BNIP3LO60238 219 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 RAMP2O60895 175 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 GFPT2O94808 682 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 ENDOD1O94919 500 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 RHOQP17081 205 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 CHRNA3P32297 505 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 RXRGP48443 463 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 STK19P49842 368 aaPredicted RBP13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 SERPINH1P50454 418 aaKnown RBP13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 NEK3P51956 506 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 YBEYP58557 167 aaPredicted RBP13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 RPS21P63220 83 aaKnown RBP13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 GNA12Q03113 381 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 CENPCQ03188 943 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 C1QBPQ07021 282 aaKnown RBP13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 HSP90AA4PQ58FG1 418 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 C22orf39Q6P5X5 142 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 FBXL19Q6PCT2 694 aa13.15□□□□□ -0.3
SNORD88B-201ENST00000408454 RBM43Q6ZSC3 357 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms