RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 C8orf58Q8NAV2 365 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 RUFY2Q8WXA3 655 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 USP6NLQ92738 828 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 CUL5Q93034 780 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 CD180Q99467 661 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 C1QTNF7Q9BXJ2 289 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 TTYH1Q9H313 450 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 MROH8Q9H579 483 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 THAP1Q9NVV9 213 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 AMFRQ9UKV5 643 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 SARDHQ9UL12 918 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 FNDC1Q4ZHG4 1894 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 NPIPB13A6NJU9 1138 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 NPIPB5A8MRT5 1133 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 AGAP14A8MT82 685 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 TEX22C9J3V5 150 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 NPIPB4C9JG80 1138 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 SMIM22K7EJ46 135 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 GTPBP1O00178 669 aaKnown RBP5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 ALDOAP04075 364 aaKnown RBP5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 SLC3A2P08195 630 aaKnown RBP5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 LYL1P12980 280 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 AKR1B1P15121 316 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 PORP16435 677 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 SFPQP23246 707 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 DUSP1P28562 367 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 AVPR2P30518 371 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 ARL1P40616 181 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 HARS2P49590 506 aaKnown RBP5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 DIO1P49895 249 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 CDH15P55291 814 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 RPS3AP61247 264 aaKnown RBP5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 LMAN2Q12907 356 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 SLC22A25Q6T423 547 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 ADGRG6Q86SQ4 1221 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 SIRT6Q8N6T7 355 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 ETNPPLQ8TBG4 499 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 ZNF398Q8TD17 642 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 DAZAP1Q96EP5 407 aaKnown RBP5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 ASB2Q96Q27 587 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 MMS19Q96T76 1030 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 SEMA4CQ9C0C4 833 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 CIPCQ9C0C6 399 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 CTDSP1Q9GZU7 261 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 VEZTQ9HBM0 779 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 EIF2B3Q9NR50 452 aaKnown RBP5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 DIAPH3Q9NSV4 1193 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 SEPT11Q9NVA2 429 aaKnown RBP5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 GAR1Q9NY12 217 aaKnown RBP5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 KCND2Q9NZV8 630 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 MGAT4CQ9UBM8 478 aa5.33□□□□□ -1.56
HMGB1P13-201ENST00000406019 PASKQ96RG2 1323 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 PRAMEF2O60811 474 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 KAT7O95251 611 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 URODP06132 367 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 ATF7P17544 494 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 PRPH2P23942 346 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 ACTN2P35609 894 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 BSGP35613 385 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 HNF1BP35680 557 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 KRT20P35900 424 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 ARL3P36405 182 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 GPC5P78333 572 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 RAE1P78406 368 aaKnown RBP5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 TXNL4AP83876 142 aaKnown RBP5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 CREB5Q02930 508 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 CCDC15Q0P6D6 951 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 HNRNPA0Q13151 305 aaKnown RBP5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 DCTN2Q13561 401 aaKnown RBP5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 CCDC184Q52MB2 194 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 CEP78Q5JTW2 689 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 UBAP2Q5T6F2 1119 aaKnown RBP5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 TMEM88Q6PEY1 159 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 MON1AQ86VX9 555 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 LAS2Q8IYD9 372 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 ENDOVQ8N8Q3 282 aaKnown RBP5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 TNIP2Q8NFZ5 429 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 EDC3Q96F86 508 aaKnown RBP5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 EYA3Q99504 573 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 LBHD1Q9BQE6 289 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 CINPQ9BW66 212 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 RANBP17Q9H2T7 1088 aaKnown RBP5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 SYNCQ9H7C4 482 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 ABHD10Q9NUJ1 306 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 ALKBH4Q9NXW9 302 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 SEMA5BQ9P283 1151 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 OSGIN2Q9Y236 505 aa5.32□□□□□ -1.56
HMGB1P13-201ENST00000406019 B4DLN1 442 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 TMEM232C9JQI7 657 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 AP3D1O14617 1153 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 CCNDBP1O95273 360 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 ICAM3P32942 547 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 JAK3P52333 1124 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 GOLGA8FQ08AF8 430 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 DUSP28Q4G0W2 176 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 RUNDC3AQ59EK9 446 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 CFAP58Q5T655 872 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 LRCH2Q5VUJ6 765 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 SLC39A5Q6ZMH5 540 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 KRT74Q7RTS7 529 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms